کد مقاله کد نشریه سال انتشار مقاله انگلیسی نسخه تمام متن
505019 864466 2015 11 صفحه PDF دانلود رایگان
عنوان انگلیسی مقاله ISI
Prediction of hot regions in protein–protein interaction by combining density-based incremental clustering with feature-based classification
ترجمه فارسی عنوان
پیش بینی مناطق داغ در تعامل پروتئین ـ پروتئین با ترکیب خوشه بندی افزایشی مبتنی بر تراکم با طبقه بندی مبتنی بر ویژگی
کلمات کلیدی
منطقه داغ؛ خوشه بندی؛ طبقه بندی مبتنی بر ویژگی؛ تعامل پروتئین-پروتئین؛ مبتنی بر تراکم
موضوعات مرتبط
مهندسی و علوم پایه مهندسی کامپیوتر نرم افزارهای علوم کامپیوتر
چکیده انگلیسی


• Proposed method significantly improves the prediction performance for hot regions.
• We combine density-based incremental clustering with feature-based classification.
• Feature selection is used to get the best features for classification.

Discovering hot regions in protein–protein interaction is important for drug and protein design, while experimental identification of hot regions is a time-consuming and labor-intensive effort; thus, the development of predictive models can be very helpful. In hot region prediction research, some models are based on structure information, and others are based on a protein interaction network. However, the prediction accuracy of these methods can still be improved. In this paper, a new method is proposed for hot region prediction, which combines density-based incremental clustering with feature-based classification. The method uses density-based incremental clustering to obtain rough hot regions, and uses feature-based classification to remove the non-hot spot residues from the rough hot regions. Experimental results show that the proposed method significantly improves the prediction performance of hot regions.

ناشر
Database: Elsevier - ScienceDirect (ساینس دایرکت)
Journal: Computers in Biology and Medicine - Volume 61, 1 June 2015, Pages 127–137
نویسندگان
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