Article ID | Journal | Published Year | Pages | File Type |
---|---|---|---|---|
10678434 | Applied Mathematics Letters | 2005 | 6 Pages |
Abstract
A fundamental task in evolutionary biology is the amalgamation of a collection P of leaf-labelled trees into a single parent tree. A desirable feature of any such amalgamation is that the resulting tree preserves all of the relationships described by the trees in P. For unrooted trees, deciding if there is such a tree is NP-complete. However, two polynomial-time approaches that sometimes provide a solution to this problem involve the computation of the semi-dyadic and the split closure of a set of quartets that underlies P. In this paper, we show that if a leaf-labelled tree T can be recovered from the semi-dyadic closure of some set Q of quartet subtrees of T, then T can also be recovered from the split-closure of Q. Furthermore, we show that the converse of this result does not hold, and resolve a closely related question posed in [S. Böcker, D. Bryant, A. Dress, M. Steel, Algorithmic aspects of tree amalgamation, Journal of Algorithms 37 (2000) 522-537].
Related Topics
Physical Sciences and Engineering
Engineering
Computational Mechanics
Authors
K.T. Huber, V. Moulton, C. Semple, M. Steel,