Article ID Journal Published Year Pages File Type
175602 Dyes and Pigments 2016 8 Pages PDF
Abstract

•Extended rigid rhodamines were designed via molecular simulations.•The trend of spectral properties of rhodamines agreed with TDDFT calculations.•Amine-reactive probes for bioconjugation were synthesized.•To be used as molecular ruler to study pore dilation in cationic channels.

A series of geometrically well-defined cationic fluorophores were designed based on molecular mechanics. They contain biaryl linkers to impart rigidity preventing intramolecular folding between a conjugated biomolecule and fluorophore. All probes have absorption and emission maxima within 20 nm from Texas Red, as predicted by TDDFT calculations and validated experimentally.

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Physical Sciences and Engineering Chemical Engineering Chemical Engineering (General)
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