Article ID | Journal | Published Year | Pages | File Type |
---|---|---|---|---|
2076670 | Biosystems | 2008 | 14 Pages |
Abstract
The common background of the two formalisms and the recent growing of interests in applying P systems in Systems Biology have raised the natural question of bridging this two research areas. The present paper goes in this direction, as it presents a direct simulation of a variant of P systems by means of Brane calculi. In particular, we consider a Brane calculus based on three operations called Mate/Bud/Drip, and we show how to use such system to simulate Simple symport/antiport P systems, a variant of P systems purely based on communication of objects. As an example, a simplified sodium-potassium pump modeled in Simple SA is encoded in Mate/Bud/Drip Brane calculus.
Keywords
Related Topics
Physical Sciences and Engineering
Mathematics
Modelling and Simulation
Authors
Antonio Vitale, Giancarlo Mauri, Claudio Zandron,