Article ID | Journal | Published Year | Pages | File Type |
---|---|---|---|---|
5406871 | Journal of Magnetic Resonance | 2009 | 6 Pages |
Abstract
We present a de novo high-resolution structure of the peptide Alanyl-Prolyl-Glycine using a combination of sensitive solid-state NMR techniques that each yield precise structural constraints. High-quality 13C-13C distance constraints are extracted by fitting rotational resonance width (R2W) experiments using Multimode Multipole Floquet Theory and experimental chemical shift anisotropy (CSA) orientations. In this strategy, a structure is first calculated using DANTE-REDOR and torsion angle measurements and the resulting relative CSA orientations are used as an input parameter in the 13C-13C distance calculations. Finally, a refined structure is calculated using all the constraints. We investigate the effect of different structural constraints on structure quality, as determined by comparison to the crystal structure and also self-consistency of the calculated structures. Inclusion of all or subsets of these constraints into CNS calculations resulted in high-quality structures (0.02Â Ã
backbone RMSD using all 11 constraints).
Keywords
Related Topics
Physical Sciences and Engineering
Chemistry
Physical and Theoretical Chemistry
Authors
Alexander B. Barnes, Loren B. Andreas, Matthias Huber, Ramesh Ramachandran, Patrick C.A. van der Wel, Mikhail Veshtort, Robert G. Griffin, Manish A. Mehta,