Associative role of TYMS6bpdel polymorphism and resulting hyperhomocysteinemia in the pathogenesis of preterm delivery and associated complications: A study from Northeast India

•TYMS14946bp del/del genotype is associated with the pathogenesis of PTD, fetal death/IUD and LBW of a baby.•The elevated homocysteine level is significantly associated with the pathogenesis of PTD as well as fetal death/IUD.•TYMS14946bp del/del genotype showed significant association with increased homocysteine levels in all the pregnancy cases.•TYMS1494del6 genotype is of prognostic significance and serum homocysteine levels as biomarker in understanding PTD.

Aberrations including genetic alterations in folate pathway are detrimental in multiple disease pathogenesis, including pregnancy. The present study is based on the screening of the associative role of TYMS 14946bp deletion(del) polymorphism and associated hyperhomocysteinemia in susceptibility to preterm delivery (PTD), which is strongly associated with neonatal mortality and morbidity.MethodsA total of 209 PTD cases {extremely preterm (n = 22), very preterm (n = 43) and moderately preterm (n = 144)} and 194 term delivery cases were evaluated for TYMS 14946bp deletion and its association with preterm delivery, pregnancy outcome, baby birth weight and homocysteine estimation.ResultsThe results showed that the distribution of TYMS 14946bp del/del genotype significantly increased the risk of PTD [OR = 2.801, p = 0.002] and is associated with fetal death. The TYMS 6bp ins/del and 6bp del/del genotype was associated with low birth weight (LBW) compared to 6bp ins/ins genotype in both term and PTD groups, and in case of very (p = 0.024) and moderately (p = 0.045) sub-cohorts of PTD significantly. Elevated serum homocysteine levels were significantly associated with PTD (p < 0.001) and fetal death (p = 0.013); and was also found to significantly correlate with TYMS 14946bp del/del genotype in all the pregnancy cases (p = 0.008). TYMS 6bp del/del genotype was associated with higher homocysteine levels compared to ins/ins (p = 0.005) and ins/del (p = 0.062) genotypes within the PTD group.ConclusionThe study provides crucial information regarding the importance of TYMS6bpdel/del genotype and associated hyperhomocysteinemia in susceptibility to PTD, fetal death and LBW; and thus indicating their prognostic significance of TYMS 6bp del/del genotype in PTD which is of clinical importance.