Article ID | Journal | Published Year | Pages | File Type |
---|---|---|---|---|
7689177 | TrAC Trends in Analytical Chemistry | 2015 | 26 Pages |
Abstract
The field of chemometrics has its origin in chemistry and has been widely applied to the evaluation of analytical chemical data and quantitative structure-activity relationships. Chemometric techniques apply statistical and algorithmic methods to extract information from analytical multivariate data, including fused, heterogeneous data. These techniques are now widely applied across fields as varied as food technology, environmental chemistry, process control, medical diagnostics, and metabolomics. In the mid-1980s, cross-disciplinary interaction between genetics and epidemiology led to the emergence of genetic epidemiology as a new discipline. Chemometric techniques are extremely appropriate for, and have been widely applied to, this discipline. Here, we present a broad review of the application of chemometric techniques to the fields of genetic epidemiology and statistical genetics. We also consider some future directions. We focus on chemometrics-based regression methodologies in genetic association studies.
Keywords
QTLsiPLSiPLSbiPLSInterval PLSMBVOPLSASCAeQTLOLSVIPCCASVDpChATNCBIFDRRPLSSVRPLSRMSEPNHGRIPCABasic Local Alignment Search ToolGenetic algorithmMANOVABlasthemGenetic epidemiologyExpression quantitative trait locisingular value decompositionCanonical correlation analysismultivariate analysis of variancePrincipal component analysisQuantitative trait lociPartial least squaresordinary least squaresroot mean square error of predictionMultivariate dataRidge regressionSupport vector regressionBayesian regressionprincipal component regressionLinkage disequilibriumNational Human Genome Research InstituteNational Center for Biotechnology InformationGenome-wide association studiesGWASfalse discovery rateSelectivity ratioRare variantPCRSingle-nucleotide polymorphismSingle nucleotide polymorphismOrthogonal projections to latent structuresSNPStatistical geneticsChemometrics
Related Topics
Physical Sciences and Engineering
Chemistry
Analytical Chemistry
Authors
Gerard G. Dumancas, Sindhura Ramasahayam, Ghalib Bello, Jeff Hughes, Richard Kramer,