| Article ID | Journal | Published Year | Pages | File Type |
|---|---|---|---|---|
| 976948 | Physica A: Statistical Mechanics and its Applications | 2007 | 7 Pages |
Abstract
Time series for the distance between selected residues surrounding the active site in bovine pancreatic trypsin inhibitor (BPTI) protein are analyzed using a one-dimensional Langevin-type stochastic difference equation. The time series are extracted from molecular dynamics simulations performed on the protein in vacuum and water. The deterministic and stochastic contributions to the time series show interesting behavior for certain residue pairs only, and only in solvated molecular dynamics simulations.
Related Topics
Physical Sciences and Engineering
Mathematics
Mathematical Physics
Authors
Wael I. Karain, Basem Ajarmah, Nael I. Qaraeen,