| Article ID | Journal | Published Year | Pages | File Type |
|---|---|---|---|---|
| 10536741 | Biochimica et Biophysica Acta (BBA) - Proteins and Proteomics | 2014 | 20 Pages |
Abstract
⺠The semantic annotation using ontologies is a prerequisite for the semantic web. ⺠The HUPO-PSI defined a set of XML-based standard formats for proteomics. ⺠These standard formats allow the referencing of CV terms defined in obo files. ⺠The CV terms can be used to enforce MIAPE compliance of the data files. ⺠The mass spectrometry CV is constantly maintained in a community process.
Keywords
NetCDFTrans-proteomic pipelineMIAPEASCIIXSLTOWLIUPACBTOOBIURIEBIOLSSRMHDF5TPPNCBIASTMAPIMolecular interactionParAmerican society for testing and materialsICDApplication programming interfaceWeb ontology languageInternational Classification of DiseasesMass spectrometryPridematrix assisted laser desorption ionizationMALDINational Center for Biotechnology InformationMeshDescription logicEuropean Bioinformatics InstituteMedical Subject Headingsselected reaction monitoringControlled vocabularyControlled vocabulariesAmerican standard code for information interchange
Related Topics
Physical Sciences and Engineering
Chemistry
Analytical Chemistry
Authors
Gerhard Mayer, Andrew R. Jones, Pierre-Alain Binz, Eric W. Deutsch, Sandra Orchard, Luisa Montecchi-Palazzi, Juan Antonio VizcaÃno, Henning Hermjakob, David Oveillero, Randall Julian, Christian Stephan, Helmut E. Meyer, Martin Eisenacher,