Article ID Journal Published Year Pages File Type
427210 Information Processing Letters 2013 6 Pages PDF
Abstract

It has recently been shown that the NP-hard problem of calculating the minimum number of hybridization events that is needed to explain a set of rooted binary phylogenetic trees by means of a hybridization network is fixed-parameter tractable if an instance of the problem consists of precisely two such trees. In this paper, we show that this problem remains fixed-parameter tractable for an arbitrarily large set of rooted binary phylogenetic trees. In particular, we present a quadratic kernel.

► We study computing the hybridization number of sets of rooted phylogenetic trees. ► We show fixed-parameter tractability for arbitrarily many binary trees. ► In particular, there exists a quadratic kernel. ► To establish this result, we use two reductions and the concept of generators. ► Previously, only heuristics were known for this problem.

Related Topics
Physical Sciences and Engineering Computer Science Computational Theory and Mathematics
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