Article ID | Journal | Published Year | Pages | File Type |
---|---|---|---|---|
431120 | Journal of Discrete Algorithms | 2008 | 14 Pages |
Abstract
In this paper, we give a (polynomial-time) 3-approximation algorithm for the rooted subtree prune and regraft distance between two phylogenetic trees. This problem is known to be NP-complete and the best previously known approximation algorithm is a 5-approximation. We also give a faster fixed-parameter algorithm for the rooted subtree prune and regraft distance than was previously known.
Keywords
Related Topics
Physical Sciences and Engineering
Computer Science
Computational Theory and Mathematics
Authors
Magnus Bordewich, Catherine McCartin, Charles Semple,