Article ID Journal Published Year Pages File Type
431120 Journal of Discrete Algorithms 2008 14 Pages PDF
Abstract

In this paper, we give a (polynomial-time) 3-approximation algorithm for the rooted subtree prune and regraft distance between two phylogenetic trees. This problem is known to be NP-complete and the best previously known approximation algorithm is a 5-approximation. We also give a faster fixed-parameter algorithm for the rooted subtree prune and regraft distance than was previously known.

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Physical Sciences and Engineering Computer Science Computational Theory and Mathematics
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