Article ID Journal Published Year Pages File Type
4624750 Advances in Applied Mathematics 2014 16 Pages PDF
Abstract

We study a circular order on labelled, m-edge-coloured trees with k vertices, and show that the set of such trees with a fixed circular order is in bijection with the set of RNA m-diagrams of degree k  , combinatorial objects which can be regarded as RNA secondary structures of a certain kind. We enumerate these sets and show that the set of trees with a fixed circular order can be characterized as an equivalence class for the transitive closure of an operation which, in the case m=3m=3, arises as an induction in the context of interval exchange transformations.

Related Topics
Physical Sciences and Engineering Mathematics Applied Mathematics
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