Article ID | Journal | Published Year | Pages | File Type |
---|---|---|---|---|
6930342 | Journal of Computational Physics | 2016 | 16 Pages |
Abstract
We consider PDE/ODE systems for the simulation of intercellular signaling in multicellular environments. The intracellular processes for each cell described here by ODEs determine the long-time dynamics, but the PDE part dominates the solving effort. Thus, it is not clear if commonly used decoupling methods can outperform a coupling approach. Based on a sensitivity analysis, we present a systematic comparison between coupling and decoupling approaches for this class of problems and show numerical results. For biologically relevant configurations of the model, our quantitative study shows that a coupling approach performs much better than a decoupling one.
Related Topics
Physical Sciences and Engineering
Computer Science
Computer Science Applications
Authors
Thomas Carraro, Elfriede Friedmann, Daniel Gerecht,