Article ID Journal Published Year Pages File Type
7806984 Journal of Molecular Structure 2018 26 Pages PDF
Abstract
The study deals with CoMFA, CoMSIA and HQSAR to explore the important features of tetrahydroimidazo[4,5,1-jk][1,4]benzodiazepinone (TIBO) derivatives for exerting potent HIV-1 reverse transcriptase (HIV-1 RT) inhibitors activity. The cross-validated q2 value of CoMFA model is 0.641 and the non-cross-validated r2 value is 0.847. The best cross-validated q2 value of CoMSIA Model is 0.706 and the non-cross-vaildated r2 value is 0.939. The most effective HQSAR model was obtained that the cross-validation q2 value of 0.839, the non-cross-validated r2 value of 0.942, the standard error of prediction SDCV value of 0.604, and the best hologram length value of 307 using atoms and bonds as fragment distinctions. The statistical parameters from models indicate that the data are well fitted and have high predictive ability. Furthermore, Molecular docking was employed to explore the binding requirements between the ligands and the receptor protein which included several hydrogen bonds between the TIBO inhibitors and active site residues. Observations derived from these QSAR modeling study may be utilized further in designing promising HIV-1 reverse transcriptase inhibitors.
Related Topics
Physical Sciences and Engineering Chemistry Organic Chemistry
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