Reed litter Si content affects microbial community structure and the lipid composition of an invertebrate shredder during aquatic decomposition

•High Si concentration in reed leads to a decline of gram positive bacteria in biofilm.•High Si concentration in reed leads to a decline of gram negative bacteria in FPOM.•Basal decomposers were affected by the Si availability in plant resources.•Si changed the lipid composition in Gammarus pulex.

The decomposition of plant litter is an important mechanism in regard to energy and nutrient dynamics of ecosystems. Silicon concentration of plant tissue can affect these processes by changing litter quality, i.e. nutrient stoichiometry and cellulose and phenols content. To determine which group of microbial decomposers benefits from high Si content in plants and how this impacts on animal decomposers, a batch experiment was conducted with reed leaf litter (Phragmites australis) differing in Si content in the presence/absence of invertebrate shredders (Gammarus pulex). Lipid concentration of G. pulex, in reed litter and fine particulate matter (FPOM) were examined. High Si concentration in reed resulted in a decline of gram positive bacteria in the heterotrophic biofilm and of gram negative bacteria in FPOM. The lipid composition in the next trophic level, the decomposer G. pulex, changed too, indicating a diet shift in favor of bacteria and algae with increasing litter Si concentration. Thus, basal decomposers were affected by the Si availability in plant resources, and these effects likely persist along the food chain, as FPOM is a dominant food supply for other groups, e.g. collectors. This impact of Si content on plant substrate quality for decomposer food webs may have global relevance, due to related modifications in carbon and nutrient cycling during litter decomposition.