Characterization of progenies derived from pollination of pomegranate cv. Malase-Tourshe-Saveh using fruit traits and RAPD molecular marker

Fruit traits and molecular markers (RAPD) were used to survey genetic similarities and inheritance pattern of offspring, derived from self- and open pollination of pomegranate cv. Malase-Tourshe-Saveh (MTS) as well as progenies derived from cross between ‘MTS’ and ‘Narm-Daneh’ (ND) a soft-seed cultivar in the present study. Clustering based on fruit traits, divided the accessions firstly into two major groups, sweets and sour or sweet–sours. Members of sub-clusters were different in fruit characters, and seed softness also was affecting the grouping of individuals. Offspring of ‘MTS’ × ’ND’ showed somehow seed softness with varying degrees compared to other individuals. In RAPD analysis, by using 26 polymorphic primers, 325 fragments were produced from 39 individuals, among which 70 reproducible, polymorphic bands were scored for data analysis. NTsys and Bootstrap software were used for RAPD data analysis and respective dendrogram depicted by Jaccard's similarity coefficients using UPGMA method. The similarity coefficients were ranging from 0.2 to 0.94 and the lowest was obtained between pollen parent (ND cv.) and a genotype from open pollination of MTS cultivar. The highest similarity coefficient (0.94) was observed between two offspring both from self-pollination of MTS cultivar. In corresponding dendrogram, pollen parent was separated from other genotypes and laid individually in a sub-cluster, while the mother plant clustered with its progenies. In addition, some marker–trait associations were observed, especially for seed softness.