Article ID | Journal | Published Year | Pages | File Type |
---|---|---|---|---|
6368977 | Journal of Theoretical Biology | 2016 | 10 Pages |
Abstract
This work is devoted to illustrating different methods recently introduced for quantifying sequence distances and variability. Most of the alignment-free methods rely on counting words, which are small contiguous fragments of the genome. Our approach considers the locations of nucleotides in the sequences and relies more on appropriate statistical distributions. The results of this technique for comparing sequences, by extracting information and comparing matching fidelity and location regularization information, are very encouraging, specifically to classify mutation sequences.
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Authors
Saeid Amiri, Ivo D. Dinov,