Article ID | Journal | Published Year | Pages | File Type |
---|---|---|---|---|
6891284 | Computer Methods and Programs in Biomedicine | 2016 | 12 Pages |
Abstract
A one-million-node and one-billion-edge protein sequence network defined by a BLAST similarity matrix can be processed with an upper-class personal computer in 100 minutes. Further improvement in speed is possible via parallel data processing, while the extension toward several million nodes needs intermediary data storage, for example on solid state drives.
Keywords
Related Topics
Physical Sciences and Engineering
Computer Science
Computer Science (General)
Authors
László Szilágyi, Sándor M. Szilágyi,