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Daneshyari Biophysics Journas Latest Articles

Biophysics Research Articles

Flexibility of Aromatic Residues in the Active-Site Gorge of Acetylcholinesterase: X-ray versus Molecular Dynamics
Fulltext Access 12 Pages 2008
Simulating Dark Expressions and Interactions of frq and wc-1 in the Neurospora Circadian Clock
Fulltext Access 12 Pages 2008
Characterization of the Interactions between Fluoroquinolone Antibiotics and Lipids: a Multitechnique Approach
Fulltext Access 12 Pages 2008
α2δ1 Dihydropyridine Receptor Subunit Is a Critical Element for Excitation-Coupled Calcium Entry but Not for Formation of Tetrads in Skeletal Myotubes
Fulltext Access 12 Pages 2008
Fluorescence Fluctuation Spectroscopy in the Presence of Immobile Fluorophores
Fulltext Access 12 Pages 2008
A Mathematical Model of Airway and Pulmonary Arteriole Smooth Muscle
Fulltext Access 12 Pages 2008
Structure of the Cytosolic Part of the Subunit b-Dimer of Escherichia coli F0F1-ATP Synthase
Fulltext Access 12 Pages 2008
Low-Frequency Stimulation Induces Stable Transitions in Stereotypical Activity in Cortical Networks
Fulltext Access 12 Pages 2008
Micropatterning of Single Endothelial Cell Shape Reveals a Tight Coupling between Nuclear Volume in G1 and Proliferation
Fulltext Access 12 Pages 2008
Initial Reaction Dynamics of Proteorhodopsin Observed by Femtosecond Infrared and Visible Spectroscopy
Fulltext Access 12 Pages 2008
Elasticity, Strength, and Water Permeability of Bilayers that Contain Raft Microdomain-Forming Lipids
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Interaction of LL-37 with Model Membrane Systems of Different Complexity: Influence of the Lipid Matrix
Fulltext Access 12 Pages 2008
Salt-Mediated Electrostatics in the Association of TATA Binding Proteins to DNA: A Combined Molecular Mechanics/Poisson-Boltzmann Study
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Productive Hemifusion Intermediates in Fast Vesicle Fusion Driven by Neuronal SNAREs
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Mechanistic Studies on ADAMTS13 Catalysis
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Lipid Bilayer Structure Determined by the Simultaneous Analysis of Neutron and X-Ray Scattering Data
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Lipoelectric Modification of Ion Channel Voltage Gating by Polyunsaturated Fatty Acids
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Modeling Study of the Effects of Membrane Surface Charge on Calcium Microdomains and Neurotransmitter Release
Fulltext Access 12 Pages 2008
Quantitative Lifetime Unmixing of Multiexponentially Decaying Fluorophores Using Single-Frequency Fluorescence Lifetime Imaging Microscopy
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Early Stages of Amyloid Fibril Formation Studied by Liquid-State NMR: The Peptide Hormone Glucagon
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Docosahexaenoic Acid Enhances Segregation of Lipids between Raft and Nonraft Domains: 2H-NMR Study
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Modeling Analytical Ultracentrifugation Experiments with an Adaptive Space-Time Finite Element Solution for Multicomponent Reacting Systems
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Defining the Role of Matrix Compliance and Proteolysis in Three-Dimensional Cell Spreading and Remodeling
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Probing Intranuclear Environments at the Single-Molecule Level
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Spatial Regulation Improves Antiparallel Microtubule Overlap during Mitotic Spindle Assembly
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Magnitude of Sarcomere Extension Correlates with Initial Sarcomere Length during Lengthening of Activated Single Fibers from Soleus Muscle of Rats
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RNA association or phosphorylation of the RS domain prevents aggregation of RS domain-containing proteins
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Identification, cloning and functional characterization of a novel dermonecrotic toxin (phospholipase D) from brown spider (Loxosceles intermedia) venom
Fulltext Access 12 Pages 2008
Participation of chlorobiumquinone in the transplasma membrane electron transport system of Leishmania donovani promastigote: Effect of near-ultraviolet light on the redox reaction of plasma membrane
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Interaction of cardiac troponin with cardiotonic drugs: A structural perspective
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Troponin: Regulatory function and disorders
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Adenosine Triphosphate-Linked Concentration of Calcium Ions in a Particulate Fraction of Rabbit Muscle
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Model systems for the discovery and development of antiarrhythmic drugs
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Susceptibility genes & modifiers for cardiac arrhythmias
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Atrial proarrhythmia due to increased inward rectifier current (IK1) arising from KCNJ2 mutation - A simulation study
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Caveolae, ion channels and cardiac arrhythmias
Fulltext Access 12 Pages 2008
Modulation of SR Ca Release by Luminal Ca and Calsequestrin in Cardiac Myocytes: Effects of CASQ2 Mutations Linked to Sudden Cardiac Death
Fulltext Access 12 Pages 2008
Evidence for Intermediate S-States as Initial Phase in the Process of Oxygen-Evolving Complex Oxidation
Fulltext Access 12 Pages 2008
Mechanism of Robust Circadian Oscillation of KaiC Phosphorylation In Vitro
Fulltext Access 12 Pages 2008
Cofactor Dependent Conformational Switching of GTPases
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Conduction of Na+ and K+ through the NaK Channel: Molecular and Brownian Dynamics Studies
Fulltext Access 12 Pages 2008
Quantitative Measurement of cAMP Concentration Using an Exchange Protein Directly Activated by a cAMP-Based FRET-Sensor
Fulltext Access 12 Pages 2008
Macromolecular Crowding and Size Effects on Probe Microviscosity
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Secondary Structure and Compliance of a Predicted Flexible Domain in Kinesin-1 Necessary for Cooperation of Motors
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Potential Cation and H+ Binding Sites in Acid Sensing Ion Channel-1
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The C-Terminal Transmembrane Domain of Bcl-xL Mediates Changes in Mitochondrial Morphology
Fulltext Access 12 Pages 2008
Sequence-Dependent Variations Associated with H2A/H2B Depletion of Nucleosomes
Fulltext Access 12 Pages 2008
Elastic Membrane Heterogeneity of Living Cells Revealed by Stiff Nanoscale Membrane Domains
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Precise Measurement of Diffusion Coefficients using Scanning Fluorescence Correlation Spectroscopy
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Ligand Binding to the Voltage-Gated Kv1.5 Potassium Channel in the Open State—Docking and Computer Simulations of a Homology Model
Fulltext Access 12 Pages 2008
Small- and Large-Scale Conformational Changes of Adenylate Kinase: A Molecular Dynamics Study of the Subdomain Motion and Mechanics
Fulltext Access 12 Pages 2008
Conformational Transition Pathways Explored by Monte Carlo Simulation Integrated with Collective Modes
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Twirling of Actin by Myosins II and V Observed via Polarized TIRF in a Modified Gliding Assay
Fulltext Access 12 Pages 2008
Ensemble Modeling of Metabolic Networks
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Cylindrical Illumination Confocal Spectroscopy: Rectifying the Limitations of Confocal Single Molecule Spectroscopy through One-Dimensional Beam Shaping
Fulltext Access 12 Pages 2008
Effect of Ca2+ Ions on the Adhesion and Mechanical Properties of Adsorbed Layers of Human Osteopontin
Fulltext Access 12 Pages 2008
Kinetics of Transmembrane Transport of Small Molecules into Electropermeabilized Cells
Fulltext Access 12 Pages 2008
Computational Modeling of Three-Dimensional Electrodiffusion in Biological Systems: Application to the Node of Ranvier
Fulltext Access 12 Pages 2008
Reversal of Cell Polarity and Actin-Myosin Cytoskeleton Reorganization under Mechanical and Chemical Stimulation
Fulltext Access 12 Pages 2008
Potential Protein Toxicity of Synthetic Pigments: Binding of Poncean S to Human Serum Albumin
Fulltext Access 12 Pages 2008
Simulations of Electrophoretic RNA Transport Through Transmembrane Carbon Nanotubes
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Exploring the Parameter Space of Complex Self-Assembly through Virus Capsid Models
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A Biological Interpretation of Transient Anomalous Subdiffusion. II. Reaction Kinetics
Fulltext Access 12 Pages 2008
Nanoparticles as Fluorescence Labels: Is Size All that Matters?
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Asymmetric Structural Features in Single Supported Lipid Bilayers Containing Cholesterol and GM1 Resolved with Synchrotron X-Ray Reflectivity
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Profiling the Thermodynamic Softness of Adenoviral Promoters
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Dynamics of the Preprotein Translocation Channel of the Outer Membrane of Mitochondria
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The Viscoelasticity of Membrane Tethers and Its Importance for Cell Adhesion
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FTIR Study of the Photoinduced Processes of Plant Phytochrome Phya using Isotope-Labeled Bilins and Density Functional Theory Calculations
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Diffusive Coupling and Network Periodicity: A Computational Study
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Mechanical Properties of Actin Stress Fibers in Living Cells
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Mutations Affecting the Oligomerization Interface of G-Protein-Coupled Receptors Revealed by a Novel De Novo Protein Design Framework
Fulltext Access 12 Pages 2008
Role of Extracellular Glutamic Acids in the Stability and Energy Landscape of Bacteriorhodopsin
Fulltext Access 12 Pages 2008
Electrotonic Myofibroblast-to-Myocyte Coupling Increases Propensity to Reentrant Arrhythmias in Two-Dimensional Cardiac Monolayers
Fulltext Access 12 Pages 2008
Influence of Proline on the Thermostability of the Active Site and Membrane Arrangement of Transmembrane Proteins
Fulltext Access 12 Pages 2008
Structure, Dynamics, and Branch Migration of a DNA Holliday Junction: A Single-Molecule Fluorescence and Modeling Study
Fulltext Access 12 Pages 2008
Trans-Channel Interactions in Batrachotoxin-Modified Skeletal Muscle Sodium Channels: Voltage-Dependent Block by Cytoplasmic Amines, and the Influence of μ-Conotoxin GIIIA Derivatives and Permeant Ions
Fulltext Access 12 Pages 2008
Rate Constant and Reaction Coordinate of Trp-Cage Folding in Explicit Water
Fulltext Access 12 Pages 2008
The Membrane Potential and its Representation by a Constant Electric Field in Computer Simulations
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Ligand Escape Pathways and (Un)Binding Free Energy Calculations for the Hexameric Insulin-Phenol Complex
Fulltext Access 12 Pages 2008
Generalized Pattern Search Algorithm for Peptide Structure Prediction
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Chirality-Based Signatures of Local Protein Environments in Two-Dimensional Optical Spectroscopy of Two Species Photosynthetic Complexes of Green Sulfur Bacteria: Simulation Study
Fulltext Access 12 Pages 2008
Models of Toxic β-Sheet Channels of Protegrin-1 Suggest a Common Subunit Organization Motif Shared with Toxic Alzheimer β-Amyloid Ion Channels
Fulltext Access 12 Pages 2008
Extracellular Charge Adsorption Influences Intracellular Electrochemical Homeostasis in Amphibian Skeletal Muscle
Fulltext Access 12 Pages 2008
Stochastic Receptor Expression Allows Sensitive Bacteria to Evade Phage Attack. Part II: Theoretical Analyses
Fulltext Access 12 Pages 2008
Stochastic Receptor Expression Allows Sensitive Bacteria to Evade Phage Attack. Part I: Experiments
Fulltext Access 12 Pages 2008
An Error Analysis for Two-State Protein-Folding Kinetic Parameters and φ-Values: Progress toward Precision by Exploring pH Dependencies on Leffler Plots
Fulltext Access 12 Pages 2008
Tropomyosin Dynamics in Cardiac Thin Filaments: A Multisite Förster Resonance Energy Transfer and Anisotropy Study
Fulltext Access 12 Pages 2008
Path of Nascent Polypeptide in Exit Tunnel Revealed by Molecular Dynamics Simulation of Ribosome
Fulltext Access 12 Pages 2008
Regulatory interactions in the dimeric cytochrome bc1 complex: The advantages of being a twin
Fulltext Access 13 Pages 2008
Pulse ENDOR and density functional theory on the peridinin triplet state involved in the photo-protective mechanism in the peridinin–chlorophyll a–protein from Amphidinium carterae
Fulltext Access 13 Pages 2008
Dopamine modulates mitochondrial function in viable SH-SY5Y cells possibly via its interaction with complex I: Relevance to dopamine pathology in schizophrenia
Fulltext Access 13 Pages 2008
Personal recollections on the discovery of the ryanodine receptors of muscle
Fulltext Access 13 Pages 2008
Redox control in trypanosomatids, parasitic protozoa with trypanothione-based thiol metabolism
Fulltext Access 13 Pages 2008
Lysosomes and oxidative stress in aging and apoptosis
Fulltext Access 13 Pages 2008
Troponin
Fulltext Access 13 Pages 2008
Both the N-terminal fragment and the protein–protein interaction domain (PDZ domain) are required for the pro-apoptotic activity of presenilin-associated protein PSAP
Fulltext Access 13 Pages 2008
The Yin and Yang of lactosylceramide metabolism: Implications in cell function
Fulltext Access 13 Pages 2008
Functional role of glycosphingolipids and gangliosides in control of cell adhesion, motility, and growth, through glycosynaptic microdomains
Fulltext Access 13 Pages 2008
Oligomeric BAX induces mitochondrial permeability transition and complete cytochrome c release without oxidative stress
Fulltext Access 13 Pages 2008
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