Effects of β-κ-casein (CSN2-CSN3) haplotypes, β-lactoglobulin (BLG) genotypes, and detailed protein composition on coagulation properties of individual milk of Simmental cows

The aim of this study was to investigate the effects of CSN2-CSN3 (β-κ-casein) haplotypes, BLG (β-lactoglobulin) genotypes, content of milk protein fractions, and protein composition on coagulation properties of milk (MCP). Rennet coagulation time (RCT) and curd firmness (a30) were measured using a computerized renneting meter, and the contents of major milk protein fractions were quantified by reversed-phase HPLC in individual milk samples of 2,167 Simmental cows. Cow genotypes at CSN2, CSN3, and BLG were ascertained by reversed-phase HPLC, and CSN2-CSN3 haplotype probabilities were estimated for each cow. Phenotypes for MCP were regressed on CSN2-CSN3 haplotype probabilities using linear models that also included the effects of herd-test-day, parity, days in milk, pH, somatic cell score, renneting meter sensor, sire of the cow, BLG genotype, and content of major protein fractions or, alternatively, protein composition. When the statistical model did not account for protein fraction contents or protein composition, haplotypes carrying CSN3 B were associated with shorter RCT and greater a30 compared with those carrying CSN3 A. Haplotypes carrying CSN2 B had the effect of decreasing RCT and increasing a30 relative to haplotype A2A. When effects of protein fractions content or protein composition were added to the model, no difference across haplotypes due to CSN3 and CSN2 alleles was observed for MCP, with the exception of the effect of CSN2 B on RCT, which remained markedly favorable. Hence, the effect of CSN3 B on MCP is related to a variation in protein composition caused by the allele-specific expression of κ-casein, rather than to a direct role of the protein variant on the coagulation process. In addition, the favorable effect exerted by CSN2 B on a30 was caused by the increased β-casein content in milk. Conversely, CSN2 B is likely to exert a direct genetic effect on RCT, which does not depend upon variation of β-casein content associated with CSN2 B. Increased RCT was observed for milk yielded by BLG BB cows, even when models accounted for protein composition. Rennet clotting time was favorably affected by κ-casein content and percentage of κ-casein to total casein, whereas a30 increased when contents and percentages of β-CN and κ-CN increased. Changes of milk protein composition and allele frequency at casein and whey protein genes affect variation of MCP.