Keywords: Affymetrix; Bayesian; Biomarker; Inflammation; Systems; Transcriptome;
مقالات ISI (ترجمه نشده)
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Keywords: Tomato; Early blight; Affymetrix; Microarray; Resistance; Transcription factor
Keywords: MARK2; Microarray; Affymetrix; Gene set enrichment analysis; Lung cancer
Keywords: HepG2 cells; Cadmium; Gene expression; Affymetrix; Epigenetics; Histone modifications
Keywords: 62P10; 62P99DASL; Affymetrix; Spearman rank correlation; PAM50 classifier; Cohen’s kappa
Archival ReportCognitive Performance Among Carriers of Pathogenic Copy Number Variants: Analysis of 152,000 UK Biobank Subjects
Keywords: Affymetrix; CNV; Cognition; Neurodevelopmental; Schizophrenia; UK Biobank;
Failure to interact with Brd4 alters the ability of HPV16 E2 to regulate host genome expression and cellular movement
Keywords: Human papillomavirus; E2; Brd4; Cancer; Exon array; Affymetrix
Regulation of human genome expression and RNA splicing by human papillomavirus 16 E2 protein
Keywords: Papillomavirus; E2; Transcription; Cervical cancer; Head and neck cancer; Host genome; Regulation; Exon-array; Affymetrix; Splicing;
Discrete signal transduction pathway utilization by a neuropeptide (PACAP) and a cytokine (TNF-alpha) first messenger in chromaffin cells, inferred from coupled transcriptome-promoter analysis of regulated gene cohorts
Keywords: Affymetrix; Agilent; Chromaffin cell; Cyclic AMP; ERK; Gene induction; Microarray; NF-kB; PACAP; PAC1; Signal transduction; TNF-alpha; Transcriptional regulation; TNFR2;
Gene-expression profiling to identify genes related to spontaneous tumor regression in a canine cancer model
Keywords: CTVT; Affymetrix; IPA; TIL; IL-6; Th17
DNA microarray as a tool in establishing genetic relatedness—Current status and future prospects
Keywords: DNA microarray; Kinship analyses; Affymetrix; Distant relatedness; Single nucleotide polymorphism; Merlin; FEST
Expression of genes associated with the antigen presentation and processing pathway are consistently regulated in early Mycobacterium avium subsp. paratuberculosis infection
Keywords: Johne's disease; Mycobacterium avium subsp. paratuberculosis; Cattle; Microarray; Affymetrix; Paratuberculosis; Genomics; Antigen presentation and processing
Microarray gene expression: A study of between-platform association of Affymetrix and cDNA arrays
Keywords: Microarrays; Affymetrix; cDNA; Regression; Cubic-polynomial; LOESS; Bootstrap aggregating; Bagging; Artificial neural networks; Self-organizing maps; Feedforward networks
Differential gene expression profiling of aggressive and nonaggressive follicular carcinomas
Keywords: Follicular neoplasms; Follicular carcinoma; Gene expression; Affymetrix
Identification of nigral dopaminergic neuron-enriched genes in adult rats
Keywords: DA; dopaminergic; FACS; fluorescence-activated cell sorting; LCM; laser capture microdissection; SNc; substantia nigra pars compacta; ISH; in situ hybridization; Substantia nigra; Dopaminergic neurons; Microarray; Affymetrix; Gene expression;
Genomics of chronic allograft injury
Keywords: Affymetrix; chronic rejection; GeneChip; kidney transplantation; microarray;
Differential gene expression analysis in human monocyte-derived macrophages: Impact of cigarette smoke on host defence
Keywords: Macrophage; Cigarette smoke; Affymetrix; Interferon; Host defence;
Is there still a need for candidate gene approaches in the era of genome-wide association studies?
Keywords: Whole genome; Coverage; Microarrays; Single nucleotide polymorphisms; Affymetrix; Illumina; Candidate genes; Genome-wide association studies
Identification of Genomic Alterations Associated with the Aggressiveness of Pancreatic Cancer Using an Ultra-High-Resolution CGH Array
Keywords: Pancreatic adenocarcinoma; Genomic alterations; CGH array; Aggressiveness; Microarray; Affymetrix;
Genome-wide mapping of nucleosome positions in Schizosaccharomyces pombe
Keywords: Schizosaccharomyces pombe; Microarray; Indirect end labeling; Nucleosome position; Affymetrix; Genome-wide
Differential transcriptome analysis of intraarticular lesional vs intact cartilage reveals new candidate genes in osteoarthritis pathophysiology
Keywords: Osteoarthritis; Differential gene expression; Transcriptome; Lesional; Intact; Cartilage; RNA extraction; Whole-genome; Oligonucleotide array; Affymetrix; Pathophysiology; IGFBP-3; WISP-1; AQP-1; DNER; DAF; IFIGFBP-3, insulin-like growth factor binding pr
Gene expression profiling in colorectal cancer using microarray technologies: Results and perspectives
Keywords: Colorectal cancer; Gene expression profiling; Microarray; Affymetrix; Liver metastases
Chronic exposure to high levels of atrazine alters expression of genes that regulate immune and growth-related functions in developing Xenopus laevis tadpoles
Keywords: Herbicide; Affymetrix; Immunosuppression; Metabolism; Biomarker; Xenopus laevis;
Epileptogenesis alters gene expression pattern in rats subjected to amygdala-dependent emotional learning
Keywords: Affymetrix; fear conditioning; laser-captured microdissection; learning; status epilepticusANOVA, analysis of variance; BDNF, brain-derived neurotrophic factor; B2m, beta-2 microglobulin; CS, conditioned stimulus; FDR, false-discovery rate; HAFD, high-amp
Genomic aspects of sporadic Parkinson's disease
Keywords: Affymetrix; Gene expression; 6-Hydroxydopamine; Methamphetamine; Microarray; MPTP; Parkinson's disease; Quantitative RT-PCR
Stem cell factor induces HIF-1α at normoxia in hematopoietic cells
Keywords: Stem cell factor; c-Kit; Affymetrix; HIF-1α; Hypoxia; Receptor tyrosine kinase
Pre-filtering improves reliability of Affymetrix GeneChips results when used to analyze gene expression in complex tissues
Keywords: Affymetrix; Pre-filtering; Complex tissue
Feline immunodeficiency virus OrfA alters gene expression of splicing factors and proteasome-ubiquitination proteins
Keywords: FIV; OrfA; Microarray; Spliceosome; Splicing factors; Proteasome; Ubiquitination; Affymetrix; Ingenuity
Differential gene expression involved in oxidative stress response caused by triethylene glycol dimethacrylate
Keywords: Dental resin; Dimethacrylate; TEGDMA; Oxidative stress; Gene expression; Affymetrix
The MSX1 homeobox transcription factor is a downstream target of PHOX2B and activates the Delta–Notch pathway in neuroblastoma
Keywords: Delta; Affymetrix; MSX1; Neuroblastoma; Notch; PHOX2B; Ganglioneuroma
Gene expression in Citrus sinensis (L.) Osbeck following infection with the bacterial pathogen Candidatus Liberibacter asiaticus causing Huanglongbing in Florida
Keywords: Citrus greening; Huanglongbing; Phloem-limited bacterium; Affymetrix; Microarray
SNPs on Chips: The Hidden Genetic Code in Expression Arrays
Keywords: Affymetrix; Catechol-O-Methyl-Transferase; gene expression; genetic association; microarray; postmortem brain
Alterations in gene expression in the testis of angiotensin-(1–7)-receptor Mas-deficient mice
Keywords: Mas protooncogene; Affymetrix; Leydig cells; Steroidogenesis; Knockout mice
La plate-forme puces à l’Institut Cochin : pourquoi et comment
Keywords: Puces à ADN; Affymetrix; Bio-informatiqueAffymetrix core facility Cochin Institute; Bioinformatic group Paris–Descartes University
Identification of genes expressed in the mouse limb using a novel ZPA microarray approach
Keywords: ZPA; Shh; Tmem16a; Limb; Mouse; Microarray; Affymetrix; FACS; Tcfap2b; Hlxb9; Ppp1cb; Ywhaz
Effect of bisphenol A on human chorionic gonadotrophin-stimulated gene expression of cultured mouse Leydig tumour cells
Keywords: Affymetrix; Bisphenol A (BPA); Human chorionic gonadotrophin (hCG); Endocrine disrupting chemicals (EDCs); Mouse Leydig tumour cells (mLTC-1); Steroidogenic acute regulatory protein (StAR); Steroidogenesis; Microarray; Semiquantitative RT-PCR (sqRT-PCR)
Implicaciones genéticas en la longevidad: análisis multigénico en el macho y en la hembra
Keywords: Genechip; Affymetrix; Sexo; Análisis multigénico; Longevidad; Genechip; Affymetrix; Gender; Multigenic análisis; Longevity;
The promise and perils of microarray analysis
Keywords: Microarray; Leiomyoma; Reverse transcriptase polymerase chain reaction; Affymetrix; Gene confirmation
Analysis of hybridization on the molecular barcode GeneChip microarray
Keywords: Microarrays; Affymetrix; Quantitation; Molecular barcodes; Universal platform; Sequence motifs
Gene expression profiling studies on Caenorhabditis elegans dystrophin mutants dys-1(cx-35) and dys-1(cx18)
Keywords: Microarray; Affymetrix; Duchenne muscular dystrophy; Caenorhabditis elegans; Human disease model;
Optimization and validation of small quantity RNA profiling for identifying TNF responses in cultured human vascular endothelial cells
Keywords: Affymetrix; Apoptosis; Arcturus; GeneChip; Human; Inflammation; Methods; Small sample labeling; TNF
Identification of novel genes regulated in the developing human ventral mesencephalon
Keywords: Mesencephalon; Tegmentum; Microarray; Affymetrix; Gene expression; Dopaminergic differentiation; Neural stem cells; Novel genes; Bioinformatics; Parkinson's disease
Accurate and precise transcriptional profiles from 50 pg of total RNA or 100 flow-sorted primary lymphocytes
Keywords: affymetrix; GeneChip; microarray; nucleic acid amplification; nucleic acid labeling; linear amplification; RNA amplification; small sample; limiting sample; laser capture microdissection
Lymphoblastoid cell lines differing in p53 status show clear differences in basal gene expression with minor changes after irradiation
Keywords: Gene expression profile; Industrial radiosensitivity; Prediction; Gene array; Affymetrix
Kinetics of oligonucleotide hybridization to photolithographically patterned DNA arrays
Keywords: DNA array; Photolithography; Affymetrix; Hybridization; Adsorption; Desorption; Overshoot; Langmuir; Sips; Kinetics;
Gene expression profiling of the rat hippocampus one month after focal cerebral ischemia followed by enriched environment
Keywords: Environmental enrichment; Middle cerebral artery occlusion; Spatial memory; Hippocampus; Microarray; Affymetrix;
Rapid and reversible induction of the longevity, anticancer and genomic effects of caloric restriction
Keywords: Caloric restriction; Short-term; Longevity; Cancer; Microarray; Affymetrix;
Analysis of expression patterns of translocon subunits of chloroplasts and mitochondria
Keywords: OE/IE; outer/inner envelope; Oep; outer envelope protein; Toc/Tic; translocon on outer/inner envelope of chloroplasts; Tom/Tim; translocon of the outer/inner membrane of mitochondria; Affymetrix; Correlation function; Large scale dataset analysis; Tic and
Unraveling substantia nigra sequential gene expression in a progressive MPTP-lesioned macaque model of Parkinson's disease
Keywords: Microarray; Affymetrix; Nonhuman primate; RT-PCR; Neurodegeneration;
Detecting false expression signals in high-density oligonucleotide arrays by an in silico approach
Keywords: Affymetrix; Probe; Cross-hybridization; Mistargeted; mRNA; Expression;