Keywords: بیان ژن دیجیتال; Digital gene expression; Gene; Mutant; NaCl; Peanut (Arachis hypogaea L.); RNA-seq; Salinity stress; Salinity tolerance; Soil salinity; Transcripts; Unigenes;
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Keywords: بیان ژن دیجیتال; BP; biological processes; CC; cellular components; CSF1; colony stimulating factor; Csf1R; colony stimulating factor 1 receptor; DGE; digital gene expression; GO; gene ontology; KEGG; Kyoto Encyclopedia of Genes and Genomes; MCP-1; monocyte chemotactic pr
Keywords: بیان ژن دیجیتال; Bombyx mori; Phoxim; Insulin signaling pathway; Digital gene expression; Digestive juice
Keywords: بیان ژن دیجیتال; Bombyx mori; Digital Gene Expression; Microsporidia; Midgut; Innate immune response;
Keywords: بیان ژن دیجیتال; Apis mellifera; Mating flight; Digital gene expression; miRNA; Expression difference;
Keywords: بیان ژن دیجیتال; blood-stasis syndrome; hypertension; digital gene expression; protein interaction mapping;
Keywords: بیان ژن دیجیتال; COG; the cluster of orthologous groups; GO; Gene Ontology; KEGG; The Kyoto Encyclopedia of Genes and Genomes; DGE; digital gene expression; FDR; false discovery rates; LRPK; LRR receptor protein kinase; CPK32; calcium dependent protein kinase 32; SAPK; st
Keywords: بیان ژن دیجیتال; DGE; digital gene expression; DEG; differentially expressed gene; DOF; DNA binding with one finger; CDF; CYCLING DOF FACTOR; LOV; light-oxygen-voltage; FMN; flavin mononucleotide; LKP2; LOV KELCH REPEAT PROTEIN 2; JAME; jasmonic acid methyl ester; TA; tub
Fipronil-induced toxic effects in zebrafish (Danio rerio) larvae by using digital gene expression profiling
Keywords: بیان ژن دیجیتال; Fipronil; Zebrafish; Environmentally relevant level; Digital gene expression; Toxicity;
Digital gene expression analysis in the gills of Ruditapes philippinarum exposed to short- and long-term exposures of ammonia nitrogen
Keywords: بیان ژن دیجیتال; DGE; Digital gene expression technology; UIA; un-ionized ammonia nitrogen; NMDA; N-Methyl-d-aspartic acid; DEG; differentially expressed genes; Nr; NCBI non-redundant protein sequences; Nt; NCBI non-redundant nucleotide sequences; Pfam; Protein family; KO
Identification and characterization of chemosensory gene families in the bark beetle, Tomicus yunnanensis
Keywords: بیان ژن دیجیتال; Tomicus yunnanensis; Developmental transcriptome; Digital gene expression; Chemosensory gene; Expression profile;
Endophytism or saprophytism: Decoding the lifestyle transition of the generalist fungus Phomopsis liquidambari
Keywords: بیان ژن دیجیتال; GFP; green fluorescent protein; MS; Murashige & Skoog; Dai; days after inoculation; EP; endophytic P. liquidambari; SP; saprophytic P. liquidambari; KEGG; Kyoto Encyclopedia of Genes and Genomes; DGE; digital gene expression; GO; Gene ontology; DEGs; diff
Deep sequencing-based characterization of transcriptome of Pyrus ussuriensis in response to cold stress
Keywords: بیان ژن دیجیتال; GO; Gene Ontology; COG; clusters of orthologous groups; KEGG; Kyoto Encyclopedia of Genes and Genomes; CRT; cis-acting element; DEGs; differentially expressed genes; CA; cold acclimation; qPCR; quantitative real-time RT-PCR; Pyrus ussuriensis; RNA-Seq; Co
Genome expression profile analysis of two types of new roots in apple rootstock via Solexa sequencing
Keywords: بیان ژن دیجیتال; Apple GFDB database; Apple Gene Function and Gene Family Database; GDR; Genome Database for Rosaceae; Pfam; Protein family; AR; Absorbing roots; GR; Growing roots; GO; Gene Ontology; DGE; Digital gene expression; EST; Expressed sequence tag; Root; Differe
Identification of ecdysteroid receptor-mediated signaling pathways in the hepatopancreas of the red swamp crayfish, Procambarus clarkii
Keywords: بیان ژن دیجیتال; Procambarus clarkii; Transcriptome; Digital gene expression; Ecdysteroid receptor; Signaling pathway;
Transcriptome differences between 20- and 3,000-year-old Platycladus orientalis reveal that ROS are involved in senescence regulation
Keywords: بیان ژن دیجیتال; Digital gene expression; Downregulated genes; Old trees; qRT-PCR; ROS scavenging; Reactive oxygen species; RNA-seq analysis; ROS homeostasis; Senescence resistance; Transcriptome sequencing; Unigenes;
Digital gene expression profiling of flax (Linum usitatissimum L.) stem peel identifies genes enriched in fiber-bearing phloem tissue
Keywords: بیان ژن دیجیتال; DGE; digital gene expression; DEGs; differentially expressed genes; qRT-PCR; quantitative real-time PCR; GO; the Gene Ontology database; KEGG; The Kyoto Encyclopedia of Genes and Genomes database; ESTs; expressed sequence tags; L; leaf samples; SP; stem p
Differentially expressed genes in the silk gland of silkworm (Bombyx mori) treated with TiO2 NPs
Keywords: بیان ژن دیجیتال; DGE; digital gene expression; KEGG; Kyoto Encyclopedia of Genes and Genomes; TiO2 NPs; titanium dioxide nanoparticles; GO; gene ontology; SGF-1; silk gland factor-1; ASG; anterior silk gland; MSG; middle silk gland; PSG; posterior silk gland; Fib-l; fibro
Exploring gene expression changes in the amphioxus gill after poly(I:C) challenge using digital expression profiling
Keywords: بیان ژن دیجیتال; Branchiostoma belcheri; Digital gene expression; Gill; Poly (I:C);
Identification of genes that potentially affect social dominance hierarchy in adult male giant freshwater prawns (Macrobrachium rosenbergii)
Keywords: بیان ژن دیجیتال; Transcriptomics; Male morphotypes; Digital gene expression; Freshwater prawns;
Integrated transcriptomic and proteomic analysis of the bile stress response in probiotic Lactobacillus salivarius LI01
Keywords: بیان ژن دیجیتال; LGG; Lactobacillus rhamnosus GG; DGE; digital gene expression; iTRAQ; isobaric tags for relative and absolute quantitation; RT; room temperature; RPKM; reads per kilobase of exon model per million mapped reads; DEGs; differentially expressed genes; FDR; f
DGE analysis of changes in gene expression in response to temperature and deltamethrin stress in the silkworm (Bombyx mori)
Keywords: بیان ژن دیجیتال; Bombyx mori; Temperature; Deltamethrin; Digital gene expression;
Transcriptome profiling analysis of rare minnow (Gobiocypris rarus) gills after waterborne cadmium exposure
Keywords: بیان ژن دیجیتال; Transcriptome; Rare minnow (Gobiocypris rarus); Cadmium; Digital gene expression; Inflammation
Comparative transcriptome analyses indicate enhanced cellular protection against FMDV in PK15 cells pretreated with IFN-γ
Keywords: بیان ژن دیجیتال; IFN-γ; Interferon gamma; FMDV; Foot and mouth disease virus; ISGs; IFN-stimulated genes; FMD; Foot-and-mouth disease; DGE; Digital gene expression; FDR; False discovery rate; GO; Gene Ontology; KEGG; Kyoto Encyclopedia of Genes and Genomes; qRT-PCR; Quan
Analysis of digital gene expression profiling in hemocytes of white shrimp Litopenaeus vannamei under nitrite stress
Keywords: بیان ژن دیجیتال; Digital gene expression; Hemocyte; Litopenaeus vannamei; Nitrite;
Cloning, expression and localization of mycorrhizal responsive CyENT3 from Cymbidium hybridum
Keywords: بیان ژن دیجیتال; AM; arbuscular mycorrhizae; CT; threshold cycle; DEGs; differentially expressed genes; DGE; digital gene expression; dpi; days post-inoculation; ECM; ectomycorrhizae; ENT; equilibrative nucleoside transporter; ITS; internal transcribed spacer; MH; myco-he
Deep sequencing of the scallop Chlamys farreri transcriptome response to tetrabromobisphenol A (TBBPA) stress
Keywords: بیان ژن دیجیتال; Tetrabromobisphenol A; Digital gene expression; Illumina sequencing; Differential expression; Chlamys farreri;
Transcriptomic response to low salinity stress in gills of the Pacific white shrimp, Litopenaeus vannamei
Keywords: بیان ژن دیجیتال; Digital gene expression; Salinity stress; Illumina sequencing; Litopenaeus vannamei;
Digital gene expression analysis in hemocytes of the white shrimp Litopenaeus vannamei in response to low salinity stress
Keywords: بیان ژن دیجیتال; Digital gene expression; Low salinity stress; Litopenaeus vannamei; HemocyteL. vannamei, Litopenaeus vannamei; DEG, digital gene expression; EST, Expressed Sequence Tag; RPKM, Reads Per Kilo bases per Million reads; GO, Gene Ontology; KEGG, Kyoto Encyclop
RNA-seq based on transcriptome reveals differ genetic expressing in Chlamys farreri exposed to carcinogen PAHs
Keywords: بیان ژن دیجیتال; Carcinogen PAHs; Digital gene expression; Differential expression; Chlamys farreri
A global transcriptional analysis of Megalobrama amblycephala revealing the molecular determinants of diet-induced hepatic steatosis
Keywords: بیان ژن دیجیتال; Acads; acyl-CoA dehydrogenase; ALT; alanine aminotransferase; apoa1; apolipoprotein a1; Bdh1; 3-hydroxybutyrate dehydrogenase; COG; Cluster of Orthologous Groups; Cyp7a1; cytochrome p450 7a1; DGE; digital gene expression; Dhcr7; 7-dehydrocholesterol reduc
Differential gene expression analysis of early-ripening mutants of grape (Vitis vinifera L.)
Keywords: بیان ژن دیجیتال; Grape; Digital gene expression; Fruit skin color; Early ripening
Transcription factors and anthocyanin genes related to low-temperature tolerance in rd29A:RdreB1BI transgenic strawberry
Keywords: بیان ژن دیجیتال; Digital gene expression; RdreB1BI; Low-temperature; Strawberry; CBF; C-repeat binding factor; CRT/DRE; C-repeat/dehydration responsive element; DAA; day after anthesis; DEG; differentially expressed gene; DGE; digital gene expression; DREB; dehydration re
The adverse effects of phoxim exposure in the midgut of silkworm, Bombyx mori
Keywords: بیان ژن دیجیتال; Phoxim; O,O-diethyl O-(alpha-cyanobenzylideneamino) phosphorothioate; B. mori; Bombyx mori; AChE; acetylcholinesterase; DGE; digital gene expression; LC50; lethal concentration; TPM; number of transcripts per million clean tags; PMSF; phenylmethanesulfony
Digital Gene Expression analysis in the midgut of 4008 silkworm strain infected with cytoplasmic polyhedrosis virus
Keywords: بیان ژن دیجیتال; Bombyx mori; Digital Gene Expression; Cytoplasmic polyhedrosis virus; Midgut;
Gene expression profile change and growth inhibition in Drosophila larvae treated with azadirachtin
Keywords: بیان ژن دیجیتال; Azadirachtin; Drosophila; Growth inhibition; Digital gene expression;
Digital gene expression analysis in the gills of the swimming crab (Portunus trituberculatus) exposed to elevated ambient ammonia-N
Keywords: بیان ژن دیجیتال; Digital gene expression; Ammonia-N; Portunus trituberculatus; Gill
Transcriptome profiling and digital gene expression analysis of Fallopia multiflora to discover putative genes involved in the biosynthesis of 2,3,5,4′-tetrahydroxy stilbene-2-O-β-d-glucoside
Keywords: بیان ژن دیجیتال; DGE, digital gene expression tag profiling; ESTs, expressed sequence tags; F. multiflora, Fallopia multiflora; SSH, suppression subtractive hybridization; THSG, 2,3,5,4′-tetrahydroxy stilbene-2-O-ß-d-glucosideBiosynthesis; Digital gene expression; Fallopi
Analysis of midgut gene expression profiles from different silkworm varieties after exposure to high temperature
Keywords: بیان ژن دیجیتال; DGE, digital gene expression; DEGs, differentially expressed genes; RIN, RNA integrity number; TPM, transcripts per million clean tags; qRT-PCR, quantitative real-time reverse transcription PCR; GO, gene ontologySilkworm; Midgut; Digital gene expression;
Differentially expressed genes in the ovary of the sixth day of pupal “Ming” lethal egg mutant of silkworm, Bombyx mori
Keywords: بیان ژن دیجیتال; l-em; The “Ming” lethal egg mutant; DGE; Digital gene expression; KEGG; The Kyoto Encyclopedia of Genes and Genomes; VMPs; Vitelline membrane proteins; qRT-PCR; The quantitative real-time PCR method; SilkDB; Silkworm genome database; TPM; Transcripts
Identification and expression analysis of a new glycoside hydrolase family 55 exo-β-1,3-glucanase-encoding gene in Volvariella volvacea suggests a role in fruiting body development
Keywords: بیان ژن دیجیتال; GH55; glycoside hydrolase family 55; CTAB; Hexadecyl trimethyl ammonium Bromide; PR; primordia; BU; button stage; EG; egg stage; EL; elongation stage; MA; maturation stage; DGE; digital gene expression; Q-PCR; real time quantitative PCR; iTRAQ; isobaric t
De novo characterization of transcriptome and gene expression dynamics in epidermis during the larval-pupal metamorphosis of common cutworm
Keywords: بیان ژن دیجیتال; Transcriptome; Digital gene expression; Epidermis; Chitin; Development; Nuclear receptor20E, 20-hydroxyecdysone; JH, juvenile hormone; GlcNAc, N-acetylglucosamine; GFAT, glutamine-fructose-6-phosphate aminotransferase; CHS, chitin synthase; EcRE, ecdyster
Barcoded cDNA library preparation for small RNA profiling by next-generation sequencing
Keywords: بیان ژن دیجیتال; miRNA; piRNA; Deep sequencing; Digital gene expression;
Identification of differentially expressed genes in cucumber (Cucumis sativus L.) root under waterlogging stress by digital gene expression profile
Keywords: بیان ژن دیجیتال; DGE, digital gene expression; ERF, ethylene responsive factor; POD, peroxidase; CAT, catalase; SOD, superoxide dismutase; ETR, ethylene receptor; RBOH, respiratory burst oxidase homologCucumber; Digital gene expression; Transcriptome profile; Waterlogging
A priori and a posteriori approaches for finding genes of evolutionary interest in non-model species: Osmoregulatory genes in the kidney transcriptome of the desert rodent Dipodomys spectabilis (banner-tailed kangaroo rat)
Keywords: بیان ژن دیجیتال; Digital gene expression; Molecular evolution; Water balance; 454; Next-generation sequencing; RNA-seq;
Transcriptome profiling and digital gene expression by deep-sequencing in normal/regenerative tissues of planarian Dugesia japonica
Keywords: بیان ژن دیجیتال; Digital gene expression; Dugesia japonica; Gene Ontology; Planarian; Regeneration; Transcriptome
Short ultraconserved promoter regions delineate a class of preferentially expressed alternatively spliced transcripts
Keywords: بیان ژن دیجیتال; Promoter; Ultraconservation; Alternative splicing; Digital gene expression; Genomics
Deep sequencing of the zebrafish transcriptome response to mycobacterium infection
Keywords: بیان ژن دیجیتال; Tuberculosis; Digital gene expression; Illumina sequencing; Microarray; Transcriptome profiling; Differential expression; Transcript isoforms