Keywords: ESS; effective sample size; Ma; million years ago; PSRF; potential scale reduction factor; SBW; spruce budworm; smy; substitution per site per million years; UFBS; Ultra-Fast Bootstrap support; Mitogenome; Phylogenetic divergence; Time estimation; Pliocen
مقالات ISI (ترجمه نشده)
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Keywords: New Zealand raven; Corvus; Ancient DNA; Mitogenome; Phylogeny; Osteology;
Keywords: Species identification; Mixed assemblage; Odontocete; ZooMS; Shotgun sequencing; Sanger sequencing; Mitogenome;
Keywords: Ensifera; Gene rearrangement; Mitogenome; Next generation sequencing; Phylogeny;
Keywords: BI; Bayesian inference; M; Maximum Likelihood; NJ; neighbor-joining; CO; subunit of cytochrome oxidase; Cytb; cytochrome b; NAD; NADH dehydrogenase; Mitogenome; Phylogenetics; Efficiency of molecular markers; Next generation sequencing; Invertebrates;
Keywords: Tits; Mitogenome; Nuclear segment; Comparative genomics; Phylogeny;
Keywords: Mitogenome; Passeriformes; Non-stationary; Base composition; RY coding;
The complete mitochondrial genome of Budorcas taxicolor tibetana (Artiodactyla: Bovidae) and comparison with other Caprinae species: Insight into the phylogeny of the genus Budorcas
Keywords: Budorcas taxicolor tibetana; Mitogenome; Molecular phylogeny;
Complete mitochondrial genome of Bactrocera ritsemai (Insecta: Tephritidae) and phylogenetic relationship with its congeners and related tephritid taxa
Keywords: Bactrocera ritsemai; Mitogenome; Phylogeny; Fruit flies;
Evolutionary progression of mitochondrial gene rearrangements and phylogenetic relationships in Strigidae (Strigiformes)
Keywords: BI; Bayesian inference; BIC; Bayesian information criterion; BP; bootstrap percentages; BSB; bird similarity box; CR; control region; COX; cytochrome c oxidase subunit; Cyt b; cytochrome b; G; gamma distribution substitution rates; GTR; general time-rever
Characterisation of the complete mitochondrial genome of Helice wuana (Grapsoidea: Varunidae) and comparison with other Brachyuran crabs
Keywords: Brachyura; Varunidae; Helice wuana; Mitogenome; Phylogeny;
The complete mitochondrial genome of the alvinocaridid shrimp Shinkaicaris leurokolos (Decapoda, Caridea): Insight into the mitochondrial genetic basis of deep-sea hydrothermal vent adaptation in the shrimp
Keywords: Adaptation; Hydrothermal vent; Mitogenome; Shinkaicaris leurokolos;
Evaluation of the precision ID whole MtDNA genome panel for forensic analyses
Keywords: Mitochondrial DNA; Mitogenome; Massively parallel sequencing; Next generation sequencing; Degraded DNA; Mini-amplicon; Primer tiling; Forensic genetics;
Complete mitochondrial genome of the first deep-sea spongicolid shrimp Spongiocaris panglao (Decapoda: Stenopodidea): Novel gene arrangement and the phylogenetic position and origin of Stenopodidea
Keywords: atp6; ATPase subunit 6 genes; Cytb; cytochrome b gene; cox1-3; cytochrome c oxidase subunitsI-III genes; CR; control region; mtDNA; mitochondrial DNA; PCG; protein coding gene; rRNAs; ribosomal RNA; tRNA; transfer RNA; RSCU; relative synonymous codon usag
Expression of homing endonuclease gene and insertion-like element in sea anemone mitochondrial genomes: Lesson learned from Anemonia viridis
Keywords: CO; cytochrome oxidase; HEG; homing endonuclease gene; IGR; intergenic region; mtDNA; mitochondrial DNA; ND; NADH dehydrogenase; ORF; open reading frame; PGM; personal genomic machine; Actiniaria; Group I intron; Homing endonuclease; Insertion sequence; M
A large-scale phylogeny of Microhylidae inferred from a combined dataset of 121 genes and 427 taxa
Keywords: Microhylidae; Mitogenome; Phylogeny; Supermatrix; Taxonomy; Subfamilies;
Complete mitochondrial genome of the soybean leaffolder, Omiodes indicata (Lepidoptera: Pyraloidea: Crambidae), and phylogenetic analysis for Pyraloidea
Keywords: Pyraloidea; Mitogenome; Phylogeny;
Comparative mitogenome analysis on species of four apple snails (Ampullariidae: Pomacea)
Keywords: Mitogenome; Apple snails; Pomacea; Phylogenetic analysis;
The first complete mitochondrial genome of the Japanese beetle Popillia japonica (Coleoptera: Scarabaeidae) and its phylogenetic implications for the superfamily Scarabaeoidea
Keywords: atp6; ATPase subunit 6; atp8; ATPase subunit 8; cox1-3; cytochrome c oxidase subunit I-III; cytb; cytochrome b; nad1-6, 4â¯L; NADH dehydrogenase subunit 1-6, 4L; PCGs; protein-coding genes; tRNA; transfer RNA genes; rRNA; ribosomal RNA genes; 12/16
Developmental validation of a Nextera XT mitogenome Illumina MiSeq sequencing method for high-quality samples
Keywords: Next generation sequencing (NGS); Mitogenome; Nextera XT; Illumina MiSeq;
Complete mitochondrial genome of the darkling beetle Gonocephalum outreyi (Coleoptera: Tenebrionidae) with phylogenetic implications
Keywords: Next-generation sequencing; Mitogenome; Coleoptera; Darkling beetle; Gonocephalum outreyi;
Mitogenome phylogeographic analysis of a planktonic crustacean
Keywords: Mitogenome; Phylogeography; Genetic drift; Daphnia; Daphnia magna; Palaearctic;
The amplification of the mitochondrial genome of the endangered buffy-tufted-ear marmoset Callithrix aurita (Primates: Cebidae) for massive parallel sequencing using the HiSeq 2500 platform
Keywords: Callithrix aurita; Mitochondria; Mitogenome; NGS;
Complete mitochondrial genome of Eurema blanda and phylogenetic relationship with its congener E. hecabe and other pierid butterflies
Keywords: Mitogenome; Eurema blanda; Phylogenetic relationships; Pierid butterflies; Systematics; Genomics;
Complete sequence and characterization of the mitochondrial genome of Diphyllobothrium stemmacephalum, the type species of genus Diphyllobothrium (Cestoda: Diphyllobothriidae), using next generation sequencing
Keywords: atp6, atp8; ATP synthase subunit 6 and 8 genes; cob; cytochrome b gene; cox1-cox3; cytochrome c oxidase subunit 1-3 genes; nad1-nad6; NADH dehydrogenase subunit 1-6 genes; nad4L; NADH dehydrogenase subunit 4L gene; mitogenome; mitochondrial genome; tRNA;
Zoantharian mitochondrial genomes contain unique complex group I introns and highly conserved intergenic regions
Keywords: CO; cytochrome oxidase; gDNA; genomic DNA; HEG; homing endonuclease gene; IGR; intergenic region; mtDNA; mitochondrial DNA; ND; NADH dehydrogenase; ORF; open reading frame; PGM; personal genomic machine; Colonial anemone; Group I intron; Homing endonuclea
The complete mitochondrial genome of Tonkinacris sinensis(Orthoptera: Acrididae): A tRNA-like sequence and its implications for phylogeny
Keywords: Tonkinacris sinensis; Mitogenome; tRNA-like sequence; Acrididae; Phylogeny;
Sequencing and comparative analysis of the Amblyomma sculptum mitogenome
Keywords: Amblyomma cajennense complex; Amblyomma sculptum; Next generation sequencing; Mitogenome; Comparative genomics;
Characterization of the complete mitochondrial genome of Japanagallia spinosa and Durgades nigropicta (Hemiptera: Cicadellidae: Megophthalminae)
Keywords: Cicadellidae; Durgades nigropicta; Japanagallia spinosa; Mitogenome; Phylogeny; Secondary structure;
The mitogenome of the brown pod-sucking bug Clavigralla tomentosicollis Stäl (Hemiptera: Coreidae)
Keywords: mitogenomes; mitochondrial genomes; C. tomentosicollis; Clavigralla tomentosicollis; ORF; Open Reading Frame; PCG; protein coding genes; tRNA; transfer ribonucleic acid; rRNA; ribosomal ribonucleic acid; lrRNA; large rRNA; srRNA; small rRNA; cox; cytochro
The complete mitochondrial genome of Clostera anachoreta (Lepidoptera: Notodontidae) and phylogenetic implications for Noctuoidea species
Keywords: Mitogenome; Lepidoptera; Clostera anachoreta; Phylogeny;
Phylogenetic position of the rainbow sardine Dussumieria (Dussumieriidae) and its bearing on the early evolution of the Clupeoidei
Keywords: A; adenosine; C; cytidine; G; guanosine; T; thymidine; PCR; polymerase chain reaction; ML; maximum likelihood; 16S rRNA; 16S ribosomal RNA gene; 12S rRNA; 12S ribosomal RNA gene; tRNA; transfert RNA; NGS; Mitogenome; Fish; Clupeiformes; Evolution; Phyloge
Comparative mitogenomics, phylogeny and evolutionary history of Leptogorgia (Gorgoniidae)
Keywords: Octocorals; Gorgonians; Leptogorgia; Mitogenome; Molecular phylogeny; Evolutionary history;
Comparison of complete mitochondrial DNA sequences between old and new world strains of the cowpea aphid, Aphis craccivora (Hemiptera: Aphididae)
Keywords: NWAC; new world Aphis craccivora; OWAC; old world Aphis craccivora; ORF; open reading frame; rRNA; ribosomal ribonucleic acid; tRNA; transfer ribonucleic acid; 12S RNA; small rRNA; 16S RNA; large rRNA; COXI; cytochrome oxidase c subunit 1; COXII; cytochro
Mitochondrial genome of the Christmas tree worm Spirobranchus giganteus (Annelida: Serpulidae) reveals a high substitution rate among annelids
Keywords: ATP6 and ATP8; ATPase subunits 6 and 8; bp; base pairs; CO1 - CO3; Cytochrome c oxidase subunits I-III; ND1 - ND6 and ND4L; NADH dehydrogenase subunits 1-6 and 4L; rRNA; ribosomal RNA; TDRL; tandem-duplication-random-loss; tRNA; transfer RNA; Sabell
The complete mitochondrial genome of Euproctis similis (Lepidoptera: Noctuoidea: Erebidae) and phylogenetic analysis
Keywords: Euproctis similis; Mitogenome; Phylogeny;
Phylogenetic analysis of two Plectus mitochondrial genomes (Nematoda: Plectida) supports a sister group relationship between Plectida and Rhabditida within Chromadorea
Keywords: Plectida; Plectus acuminatus; Plectus aquatilis; Mitogenome; Molecular phylogeny; Nematoda;
The mitochondrial genome sequence of a deep-sea, hydrothermal vent limpet, Lepetodrilus nux, presents a novel vetigastropod gene arrangement
Keywords: Mitogenome; Next-generation sequencing; Okinawa Trough; Vetigastropoda;
The mitogenomes of three beetles (Coleoptera: Polyphaga: Cucujiformia): New gene rearrangement and phylogeny
Keywords: Polyphaga; Mitogenome; Gene rearrangement; Phylogeny;
Complete mitochondrial DNA genome of bonnethead shark, Sphyrna tiburo, and phylogenetic relationships among main superorders of modern elasmobranchs
Keywords: Bonnethead; Mitogenome; Phylogeny; Hypnosqualea hypothesisATP, Adenosine triphosphate; bp, Base pairs; CO, Cytochrome oxidase; Cytb, Cytochrome B; D-loop, Control region; mt, Mitochondrial; myr, Million years; ML, Maximum likelihood; ND, Nicotine adenine
Comparative analysis of complete mitochondrial genomes suggests that relaxed purifying selection is driving high nonsynonymous evolutionary rate of the NADH2 gene in whitefish (Coregonus ssp.)
Keywords: Mitogenome; Positive selection; Relaxed purifying selection; dN/dS; ND2; Coregonus ssp.
Phylogenetic analyses and evolutionary timescale of Coleoptera based on mitochondrial sequence
Keywords: Coleoptera; Polyphaga; Mitogenome; Phylogeny; Divergence timeMitogenome, mitochondrial genome; BI, Bayesian inference; ML, maximum likelihood; PCGs, protein coding genes; tRNA, transfer RNA; rRNA, ribosomal RNA; cox1–3, cytochrome c oxidase subunits I–III
Complete mitochondrial genome and phylogeny of Microhyla butleri (Amphibia: Anura: Microhylidae)
Keywords: Amphibian genomics; Phylogenetics; Systematics; Mitogenome; Herpetology
Mitogenomics of Hesperelaea, an extinct genus of Oleaceae
Keywords: bp; base pair; dN; non-synonymous substitution rate; dS; synonymous substitution rate; GC content; Guanine and Cytosine content; GTR + G; General Time Reversible + Gamma; mitogenome; mitochondrial genome; NGS; Next Generation Sequencing; plastome; pla
Mitochondrial genome of Cricetulus migratorius (Rodentia: Cricetidae): Insights into the characteristics of the mitochondrial genome and the phylogenetic relationships of Cricetulus species
Keywords: Mitogenome; mitochondrial genome; mtDNA; mitochondrial DNA; Myr; million years; PCR; Polymerase chain reaction; dNTP; deoxy-ribonucleoside triphosphate; ddH2O; double distilled water; AGE; agarose gel electrophoresis; BI; Bayesian inference; ML; maximum l
The complete mitochondrial genome of Micrura ignea Schwartz & Norenburg 2005 (Nemertea: Heteronemertea) and comparative analysis with other nemertean mitogenomes
Keywords: Mitogenome; Ribbon worms; Lineidae; Phylogeny of Nemertea;
The complete mitochondrial genome sequence of the network pipefish (Corythoichthys flavofasciatus) and the analyses of phylogenetic relationships within the Syngnathidae species
Keywords: Corythoichthys flavofasciatus; Syngnathidae; Mitogenome; Phylogenetic analysis;
Portuguese mitochondrial DNA genetic diversity-An update and a phylogenetic revision
Keywords: Portugal; Phylogenetics; Mitogenome; Haplogroup U4; Haplogroup U5; Haplogroup H;
Phylogenetic analysis of the complete mitogenome sequence of the raspberry weevil, Aegorhinus superciliosus (Coleoptera: Curculionidae), supports monophyly of the tribe Aterpini
Keywords: A. superciliosus; Aegorhinus superciliosus; DNA; deoxyribonucleic acid; rRNA; ribosomal ribonucleic acid; tRNAs; transfer ribonucleic acids; μg; microgram; UACH; Universidad Austral de Chile; NCBI; National Center for Biotechnology Information; ORF; Open
Complete mitochondrial DNA sequence of the endangered giant sable antelope (Hippotragus niger variani): Insights into conservation and taxonomy
Keywords: Giant sable antelope; Mitogenome; Conservation; Divergence time;