Keywords: بدانید; AGC; automatic gain control; fc; fold change; FDR; false discovery rate; HCD; higher-energy collisional dissociation; LDS; Lithium dodecyl sulfate; LFQ; label-free quantitation; RIPA-buffer; radio immunoprecipitation assay buffer; TEAB; triethylammonium b
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Keywords: بدانید; 2D; Second-Dimension; ACN; acetonitrile; BMI; Body Mass Index; BN; Blue-Native; DAPs; Differentially Abundant Proteins; ETC; Electron Transport Chain; FDR; False Discovery Rate; GO; Gene Ontology; IAA; Iodoacetamide; IR; Insulin Resistance; iTRAQ; isobari
Keywords: بدانید; C. albicans; Candida albicans; FBS; fetal bovine serum; HCD; high-energy C-trap dissociation; MS/MS; tandem mass spectrometry; S. cerevisiae; Saccharomyces cerevisiae; SD + HLM; synthetic dextrose + histidine, leucine, methionine; TEAB; triethyl ammon
Combination of iTRAQ proteomics and RNA-seq transcriptomics reveals jasmonate-related-metabolisms central regulation during the process of Jujube witches' broom recovery by tetracycline treatment
Keywords: بدانید; JA; jasmonic acid; JWB; jujube witches' broom; MTT; month of tetracycline treatment; DEGs; differentially expressed genes; DEPs; differentially expressed proteins; JIPs; jasmonate induced protein-like; ssDNA; Single strand DNA; DNBs; DNA nanoballs; RCR;
Nitensidine B affects proteins of the glycolytic pathway and induces apoptosis in cervical carcinoma cells immortalized by HPV16
Keywords: بدانید; Cervical cancer; Nitensidine B; Apoptosis; Proteomic analysis; Glycolytic pathway; ALDOA; aldolase A; ATP; adenosine triphosphate; BSA; bovine serum albumin; CID-MS/MS; collision-induced dissociation with tandem mass spectrometry; DMSO; dimethylsulfoxide;
Integrated transcriptomic and proteomic analysis of the bile stress response in probiotic Lactobacillus salivarius LI01
Keywords: بدانید; LGG; Lactobacillus rhamnosus GG; DGE; digital gene expression; iTRAQ; isobaric tags for relative and absolute quantitation; RT; room temperature; RPKM; reads per kilobase of exon model per million mapped reads; DEGs; differentially expressed genes; FDR; f
Radiosynthesis and preliminary PET evaluation of 18F-labeled 2-(1-(3-fluorophenyl)-2-oxo-5-(pyrimidin-2-yl)-1,2-dihydropyridin-3-yl)benzonitrile for imaging AMPA receptors
Keywords: بدانید; mGluRs; metabotropic glutamate receptors; iGluRs; ionotropic glutamate receptors; NMDA; N-methyl-d-aspartate; AMPA; α-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid; PET; positron emission tomography; CNS; central nervous system; TEA[18F]; [18F]tetra
Proteomic analysis of protein composition of rat forebrain cortex exposed to morphine for 10Â days; comparison with animals exposed to morphine and subsequently nurtured for 20Â days in the absence of this drug
Keywords: بدانید; ABC; ammonium bicarbonate; ACN; acetonitrile; AC; adenylyl cyclase; CBB; Coomassie Brilliant Blue; CNS; central nervous system; DAMGO; [(2-d-alanine2-4-methylphenylalanine-5-glycineol)-enkefalin]; DADLE; [(2-d-alanine-5-d-leucine)-enkefalin]; 2D-ELFO; t
Identification of pathways related to FAF1/H. pylori-associated gastric carcinogenesis through an integrated approach based on iTRAQ quantification and literature review
Keywords: بدانید; FAF1; Fas-associated factor 1; FA; formic acid; IAA; iodoacetamide; TEAB; triethylammonium bicarbonate; RPMI-1640; Roswell Park Memorial Institute-1640; PPA; protein pathway array; SILAC; stable isotope labeling with amino acids in cell culture; ATP; aden
Master redox regulator Trx1 upregulates SMYD1 & modulates lysine methylation
Keywords: بدانید; C. I.; confidence interval; FDR; false discovery rate; GAPDH; glyceraldehyde-3-phophate dehydrogenase; ICAT; isotope-coded affinity tags; iTRAQ; isobaric tags for relative and absolute quantitation; MMTS; methyl methanethiosulfonate; PTMs; post-translatio
iTRAQ-based proteomic analysis of combination therapy with taurine, epigallocatechin gallate, and genistein on carbon tetrachloride-induced liver fibrosis in rats
Keywords: بدانید; ALT; alanine aminotransferase; AST; aspartate transaminase; BP; biological process; CC; cellular component; CCl4; carbon tetrachloride; DAVID; database for annotation, visualization, and integrated discovery; ECM; extracellular matrix; EGCG; epigallocatec
Comprehensive proteome quantification reveals NgBR as a new regulator for epithelial-mesenchymal transition of breast tumor cells
Keywords: بدانید; NgBR; Nogo-B receptor; EMT; epithelial-mesenchymal transition; PI3K; phosphatidylinositol 3-kinase; GSK-3β; glycogen synthase kinase-3β; CNS; central nervous system; EC; endothelial cells; AmNogo-B; amino-terminal domain of Nogo-B; PS-DVB; polystyrene
Synthesis of {[5-(adenin-9-yl)-2-furyl]methoxy}methyl phosphonic acid and evaluations against human adenylate kinases
Keywords: بدانید; ADP; adenosine diphosphate; AK; adenylate kinase; ANP; acyclic nucleotide phosphonate; AMP; adenosine monophosphate; AMPK; AMP-activated kinase; ATP; adenosine triphosphate; Ap4P; P1,P4-di(adenosine-5â²) tetraphosphate; Ap5P; P1,P5-di(adenosine-5â²)pent
Proteomic profiling of a mouse model of acute intestinal Apc deletion leads to identification of potential novel biomarkers of human colorectal cancer (CRC)
Keywords: بدانید; AhCre+Apcfl/fl; acute conditional transgenic deletion of the Apc gene in the murine intestinal epithelium; AhCre+Apc+/+; wild type control for acute conditional transgenic deletion of the Apc gene in the murine intestinal epithelium; Apc; adenomatous poly
Advancing the analysis of less specific proteolytic digests via nLC-ESI-QoTOF-MS/MS
Keywords: بدانید; TMT; tandem mass tag; nLC; nanoflow high-performance liquid chromatography; MS; mass spectrometry; MS/MS; tandem mass spectrometry; ESI; electrospray ionization; QoTOF; quadrupole orthogonal acceleration time-of-flight; MALDI; matrix-assisted laser desorp
Ubiquitin C-terminal Hydrolase 37, a novel predictor for hepatocellular carcinoma recurrence, promotes cell migration and invasion via interacting and deubiquitinating PRP19
Keywords: بدانید; 2D; two-dimensional; ABC; avidin-biotin complex; ACN; acetonitrile; AFP; alpha-fetoprotein; BAP1; BRCA1-associated protein-1; BCLC; Barcelona Clinic Liver Cancer; co-IP; co-immunoprecipitation; CT; computed tomography; DAB; diaminobenzidine; DDR; DNA da
Bifunctional inhibition of HIV-1 reverse transcriptase: A first step in designing a bifunctional triphosphate
Keywords: بدانید; HIV-1; human immunodeficiency virus type 1; RT; reverse transcriptase; NRTIs; nucleoside RT inhibitors; NNRTIs; nonnucleoside RT inhibitors; dNTP; deoxynucleoside triphosphate; dNMP; 3â²-deoxynucleoside monophosphate; PPi; pyrophosphate; AZT; β-d-(+)-3â
The phosphoinositide 3-kinase inhibitor LY294002, decreases aminoacyl-tRNA synthetases, chaperones and glycolytic enzymes in human HT-29 colorectal cancer cells
Keywords: بدانید; CRC; colorectal cancer; DMSO; dimethyl sulfoxide; ECL; enhanced chemiluminescence; ESI; electrospray ionization; FCS; fetal calf serum; HRP; horse-radish peroxidase; IC50; half maximal inhibitory concentration; IEF; isoelectric focusing; IPG; immobilized
TiSH - a robust and sensitive global phosphoproteomics strategy employing a combination of TiO2, SIMAC, and HILIC
Keywords: بدانید; ACN; Acetonitrile; ATP; Adenosine triphosphate; DHB; 2,5-Dihydroxy benzoic acid; dsRNA; Double stranded RNA; DTT; Dithiothreitol; FDR; False discovery rate; FWHM; Full width at half maximum; HCD; Higher-energy collision dissociation; HILIC; Hydrophilic in
Analysis of the nuclear proteome of the resurrection plant Xerophyta viscosa in response to dehydration stress using iTRAQ with 2DLC and tandem mass spectrometry
Keywords: بدانید; RWC; relative water content; DAPI; 4â²,6â²-diamidino-2-phenylindole hydrochloride; PCNA; proliferating cell nuclear antigen; TEAB; triethylammonium bicarbonate; Resurrection plants; Xerophyta viscosa; Plant nuclear proteomics; Desiccation tolerance;
Characterization of the glycated human cerebrospinal fluid proteome
Keywords: بدانید; AD; Alzheimer's disease; AGEs; Advanced glycation end products; ALS; Amyotrophic lateral sclerosis; BAC; Boronate affinity chromatography; β2M; Beta-2 microglobulin; CID; Collision-induced dissociation; CJD; Creutzfeld-Jakob disease; CML; Nε-(carboxym
Quantitative profiling of serum samples using TMT protein labelling, fractionation and LC-MS/MS
Keywords: بدانید; Proteomic profiling; Serum; GeLC-MS/MS; Tandem mass tags (TMT); Biomarker; Pancreatic cancer; 1D-PAGE; one dimensional polyacrylamide gel electrophoresis; ACN; acetonitrile; AmBic; ammonium bicarbonate; CID; collision-induced dissociation; FPLC; fast pr
iTRAQ-based quantitative proteomic analysis of Thermobifida fusca reveals metabolic pathways of cellulose utilization
Keywords: بدانید; iTRAQ; isobaric tag for relative and absolute quantification; TEAB; Triethylammonium bicarbonate buffer; TCEP; Tris 2-carboxyethyl phosphine hydrochloride; MMTS; methyl methanethiosulfonate; ACN; acetonitrile; TMHMM; TransMembrane prediction using Hidden
iTRAQ-based quantitative secretome analysis of Phanerochaete chrysosporium
Keywords: بدانید; iTRAQ; isobaric tag for relative and absolute quantification; 2D-LC-MS/MS; two dimensional liquid chromatography and tandem mass spectrometry; TEAB; Triethylammonium bicarbonate buffer; FDR; false discovery rate; TCEP; Tris 2-carboxyethyl phosphine hydr
iTRAQ-based quantitative proteomic analysis of Gloeothece sp. PCC 6909: Comparison with its sheathless mutant and adaptations to nitrate deficiency and sulfur limitation
Keywords: بدانید; AP; allophycocyanin; ATP; adenosine triphosphate; EPS; extracellular polymeric substances; FAS1; FasciclinI domain; FDR; false discovery rate; FNR; ferredoxin-NADP+ oxireductase; GS; glutamine synthetase; MMTS; methyl-methane thiosulfonate; OPP; oxidative
Enzymatic synthesis of dTDP-4-amino-4,6-dideoxy-d-glucose using GerB (dTDP-4-keto-6-deoxy-d-glucose aminotransferase)
Keywords: بدانید; ACK; acetate kinase; DH; dTDP-glucose 4,6-dehydratase; HPLC; high performance liquid chromatography; IPTG; isopropyl-d-thiogalactopyranoside; PLP; pyridoxal phosphate; SAM; S-adenosylmethionine; TEAB; tetraethylammonium borate; TGS; dTDP-glucose synthase;
Characterization and quantification of Bcl-2 antisense G3139 and metabolites in plasma and urine by ion-pair reversed phase HPLC coupled with electrospray ion-trap mass spectrometry
Keywords: بدانید; HFIP; 1,1,1,3,3,3-hexafluoro-2-propanol; CVs; coefficients of variations; CID; collision induced dissociation; CIVI; continuous intravenous infusion; ESI; electrospray ionisation; ELISA; enzyme-linked immunosorbent assay; IP-RP-HPLC; ion-pair reversed pha