کد مقاله کد نشریه سال انتشار مقاله انگلیسی نسخه تمام متن
423557 685256 2016 16 صفحه PDF دانلود رایگان
عنوان انگلیسی مقاله ISI
Correcting Gene Trees by Leaf Insertions: Complexity and Approximation
ترجمه فارسی عنوان
درختان ژن اصلاحی توسط تعداد درج برگ: پیچیدگی و تقریب
موضوعات مرتبط
مهندسی و علوم پایه مهندسی کامپیوتر نظریه محاسباتی و ریاضیات
چکیده انگلیسی

Gene tree correction has recently gained interest in phylogenomics, as it gives insights in understanding the evolution of gene families. Following some recent approaches based on leaf edit operations, we consider a variant of the problem where a gene tree is corrected by inserting leaves with labels in a multiset M. We show that the problem of deciding whether a gene tree can be corrected by inserting leaves with labels in M is NP-complete. Then, we consider an optimization variant of the problem that asks for the correction of a gene tree with leaves labeled by a multiset M′, with M′⊇M, having minimum size. For this optimization variant of the problem, we present a factor 2 approximation algorithm.

ناشر
Database: Elsevier - ScienceDirect (ساینس دایرکت)
Journal: Electronic Notes in Theoretical Computer Science - Volume 322, 18 April 2016, Pages 35-50