Effects of hydrology and river management on the distribution, abundance and persistence of cyanobacterial blooms in the Murray River, Australia

• The abundance and dispersal of a major riverine cyanobacterial bloom is reported.
• Drought, low river flow and river regulation infrastructure had marked effects.
• The genetic potential of the bloom for toxin production was established by PCR.
• Analysis for toxins indicated most were below detection limits.
• The risk of future blooms in rivers due to climate change is considerable.

Major cyanobacterial blooms (biovolume > 4 mm3 L−1) occurred in the main water reservoirs on the upper Murray River, Australia during February and March 2010. Cyanobacterial-infested water was released and contaminated rivers downstream. River flow velocities were sufficiently high that in-stream bloom development was unlikely. The location has a temperate climate but experienced drought in 2010, causing river flows that were well below the long-term median values. This coupled with very low bed gradients meant turbulence was insufficient to destroy the cyanobacteria in-stream. Blooms in the upper 500 km of the Murray and Edward Rivers persisted for 5 weeks, but in the mid and lower Murray blooms were confined to a small package of water that moved progressively downstream for another 650 km. Anabaena circinalis was the dominant species present, confirmed by 16S rRNA gene sequencing, but other potentially toxic species were also present in smaller amounts. Saxitoxin (sxtA), microcystin (mcyE) and cylindrospermopsin (aoaA) biosynthesis genes were also detected, although water sample analysis rarely detected these toxins. River water temperature and nutrient concentrations were optimal for bloom survival. The operational design of weirs and retention times within weir pools, as well as tributary inflows to and diversions from the Murray River all influenced the distribution and persistence of the blooms. Similar flow, water quality and river regulation factors were underlying causes of another bloom in these rivers in 2009. Global climate change is likely to promote future blooms in this and other lowland rivers.