کد مقاله کد نشریه سال انتشار مقاله انگلیسی نسخه تمام متن
5488223 1524072 2017 24 صفحه PDF دانلود رایگان
عنوان انگلیسی مقاله ISI
Variation approach to error threshold in generic fitness landscape
ترجمه فارسی عنوان
رویکرد متغیر به آستانه خطا در منظر تناسب اندام عمومی
موضوعات مرتبط
مهندسی و علوم پایه فیزیک و نجوم فیزیک اتمی و مولکولی و اپتیک
چکیده انگلیسی
Error threshold is the upper bound of the mutation rate such that the genetic information can pass on during reproduction. In Eigen's original proposal, the fitness landscape consists of a single peak along with other background sequences. However, realistic fitness landscapes are far more complicated and thus obstruct deeper understanding from either analytic or numerical approaches. Here we propose a variational approach to derive the error thresholds in generic fitness landscapes. When applying to the Eigen model, it delivers the correct error threshold and reveals the scaling relations between relevant parameters. For the fitness landscape with a peak-mesa profile, the two-dimensional phase diagram in the mesa fitness and the mutation rate can be computed with minimal cost. When the mesa fitness is larger than some critical value, upon increasing the mutation rate, the quasispecies changes from the peak to the mesa and then dissolves into the random background. The phase boundaries can be computed analytically within the effective-fitness approximation. At the end, the universal phase diagram in terms of the rescaled variables is explained in detail.
ناشر
Database: Elsevier - ScienceDirect (ساینس دایرکت)
Journal: Chinese Journal of Physics - Volume 55, Issue 3, June 2017, Pages 606-618
نویسندگان
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