Characterization of salt stress-induced palmelloids in the green alga, Chlamydomonas reinhardtii
Keywords: Algae; Salt tolerance; Stress; Exopolysaccharides; Palmelloid; iTRAQ;
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Quantitative tissue proteomic investigation of invasive ductal carcinoma of breast with luminal B HER2 positive and HER2 enriched subtypes towards potential diagnostic and therapeutic biomarkers
Keywords: Breast cancer; Luminal B; HER2 enriched; Quantitative proteomics; 2-D DIGE; iTRAQ
An eccentric calpain, CAPN3/p94/calpain-3
Keywords: Calpain; Autolysis; Muscular dystrophy; Molecular evolution; Structure-activity relationship; Substrate; AX; alternative exon; CaM; calmodulin; CANP; Ca2+-activated neutral protease (calpain); CAPN; calpain; CAPNS1; calpain small subunit 1; CBSW; calpai
iTRAQ-based chromatin proteomic screen reveals CHD4-dependent recruitment of MBD2 to sites of DNA damage
Keywords: DNA damage response; Chromatin fraction; iTRAQ; MBD2; CHD4; PAR;
Proteomic profiling reveals oxidative phosphorylation pathway is suppressed in longissimus dorsi muscle of weaned piglets fed low-protein diet supplemented with limiting amino acids
Keywords: Low-protein diet; iTRAQ; Proteomic profiling; Oxidative phosphorylation; Skeletal muscle; Piglet;
Proteomic analysis of differentially expressed proteins in the three developmental stages of Trichinella spiralis
Keywords: Trichinella spiralis; iTRAQ; Adult; Muscle larvae; Newborn larvae; Proteomics;
In vitro secretomics study of pterygium-derived fibroblasts by iTRAQ-based quantitative proteomics strategy
Keywords: Pterygium; Fibroblast; Secretomics; iTRAQ; LC-MS/MS; Quantitative proteomics;
Potent effects of dioscin against gastric cancer in vitro and in vivo
Keywords: Apoptosis; Cell migration; Dioscin; Gastric cancers; Proteomics; iTRAQ; isobaric tags for relative and absolute quantitation; MTT; 3-(4, 5-dimethylthiazol-2-yl) -2,5-diphenyl tetrazolium bromide; AO; acridine orange; EB; ethidium bromide; DAPI; 4,6-diamid
Characterization of proteins involved in early stage of wheat grain development by iTRAQ
Keywords: Wheat; Grain development; iTRAQ; Proteome;
iTRAQ-based quantitative proteomic analysis of Macrobrachium rosenbergii hemocytes during Spiroplasma eriocheiris infection
Keywords: Spiroplasma eriocheiris; Macrobrachium rosenbergii; Hemocytes; iTRAQ; Proteomics;
Nutrient restriction of glucose or serum results in similar proteomic expression changes in 3D colon cancer cell cultures
Keywords: Nutrient restriction; Three dimensional cell culture; Autophagy; Apoptosis; Quantitative proteomics; Colorectal cancer; NR; nutrient restriction; FBS; fetal bovine serum; iTRAQ; isobaric tags for relative and absolute quantification; SIRT1; sirtuin 1; PIA
Quantitative proteomics in Giardia duodenalis—Achievements and challenges
Keywords: 2-DE; two-dimensional gel electrophoresis; ADI; arginine deiminase; AUC; area under the curve; CW; cyst wall; CWP; cyst wall protein; DDA; data-dependent acquisition; DIA; data-independent acquisition; ERIF; environmentally resistant infective form; ESV;
Proteomics applications in Caenorhabditis elegans research
Keywords: Caenorhabditis elegans; Peptidomics; Proteomics; Systems biology; Biological applications; PD; Parkinson's disease; SILAC; Stable isotope labeling with amino acids in cell culture; iTRAQ; Isobaric tag for relative and absolute quantitation; ICAT; Isotope
Proteomic approaches to uncover MMP function
Keywords: Matrix metalloproteinases; Proteomics; Degradomics; iTRAQ; TAILS
Elevated host lipid metabolism revealed by iTRAQ-based quantitative proteomic analysis of cerebrospinal fluid of tuberculous meningitis patients
Keywords: Tuberculous meningitis; ApoB; Cerebrospinal fluid; iTRAQ; Proteomic;
Master redox regulator Trx1 upregulates SMYD1 & modulates lysine methylation
Keywords: C. I.; confidence interval; FDR; false discovery rate; GAPDH; glyceraldehyde-3-phophate dehydrogenase; ICAT; isotope-coded affinity tags; iTRAQ; isobaric tags for relative and absolute quantitation; MMTS; methyl methanethiosulfonate; PTMs; post-translatio
Differential proteomes of the cyanobacterium Cyanothece sp. CCY 0110 upon exposure to heavy metals
Keywords: Cadmium; Copper; Cyanobacteria; Cyanothece; iTRAQ; Proteome
Proteomic analysis of cell proliferation in a human hepatic cell line (HL-7702) induced by perfluorooctane sulfonate using iTRAQ
Keywords: MTT; 3-(4,5-dimethylthiazol-2-yl)-2,5-diphenyltetrazolium bromide; iTRAQ; isobaric tags for relative and absolute quantitation; Cdks; cyclin-dependent kinases; Myc; myelocytomatosis oncogene; Myt1; myelin transcription factor 1; Wee1; G2 checkpoint kinase
Phloem-exudate proteome analysis of response to insect brown plant-hopper in rice
Keywords: Nilaparvata lugens; Oryza sativa; Plant-insect interactions; BPH; brown planthopper; STs; sieve tubes; SEs; sieve elements; CCs; companion cells; SPs; sieve plates; iTRAQ; sobaric tags for relative and absolute quantitation; RGAP; receptor-like GPI-anchor
iTRAQ-based proteomic identification of proteins involved in anti-angiogenic effects of Panduratin A on HUVECs
Keywords: iTRAQ; Proteomics; Panduratin A; Anti-angiogenesis;
Valproic acid mediates miR-124 to down-regulate a novel protein target, GNAI1
Keywords: MicroRNAs; Bdnf; Adenylate cyclase inhibitor; iTRAQ; Visual cortices;
Proteomic changes during tuber dormancy release process revealed by iTRAQ quantitative proteomics in potato
Keywords: Dormancy; iTRAQ; Potato tuber; Proteome; Sprouting;
iTRAQ-based proteomic analysis of tetramethylpyrazine inhibition on lipopolysaccharide-induced microglial activation
Keywords: Tetramethylpyrazine; Microglia; Neurodegenerative diseases; ITRAQ; Proteomics;
Proteomic profile of Aspergillus flavus in response to water activity
Keywords: Aflatoxin; Filamentous fungi; ITRAQ; Osmotic-stress; Proteome;
Development and analytical comparison of microflow and nanoflow liquid chromatography/mass spectrometry procedures for quantification of cardiac troponin T in mouse hearts
Keywords: AL KO; double knock-out for ApoE and receptor for LDL; ApoE; apolipoprotein E; AST; aspartate transaminase; CK; creatine kinase; cTnT; cardiac troponin T; TnC; troponin C; TnI; troponin I; HESI; heated electrospray; ICAT; isotope-coded affinity tags; iTRA
Proteomic profile of Bithynia siamensis goniomphalos snails upon infection with the carcinogenic liver fluke Opisthorchis viverrini
Keywords: Bithynia siamensis goniomphalos; iTRAQ; Opisthorchis; Cholangiocarcinoma; Intermediate host; Snail-borne trematodes;
Differential proteomic analysis of umbilical artery tissue from preeclampsia patients, using iTRAQ isobaric tags and 2D nano LC-MS/MS
Keywords: PE; preeclampsia; iTRAQ; isobaric tag for relative and absolute quantitation; FDR; false discovery rate; IPA; Ingenuity Pathway Analysis; SCX; strong cationic-exchange chromatography; Gamete and embryo-fetal origins of adult diseases; iTRAQ; Offspring; Pr
Monitoring changes in proteome during stepwise adaptation of a MDCK cell line from adherence to growth in suspension
Keywords: 2-D DIGE; two dimensional differential gel electrophoresis; aq; aqueous; BHK; baby hamster kidney; BR; biological replicate; CDM; chemically defined medium; CHO; Chinese hamster ovary; GMEM; glasgow minimal essential medium; ERK2; extracellular signal-reg
A quantitative proteomic analysis of the tegumental proteins from Schistosoma mansoni schistosomula reveals novel potential therapeutic targets
Keywords: Schistosoma mansoni; Schistosomula; iTRAQ; Proteomics; Tegument;
Quantitative proteomics reveals ELP2 as a regulator to the inhibitory effect of TNF-α on osteoblast differentiation
Keywords: Osteoblast differentiation; Quantitative proteomics; iTRAQ; MRM; ELP2; TNF-α;
Quantitative proteomic analysis of the cellulolytic system of Clostridium termitidis CT1112 reveals distinct protein expression profiles upon growth on α-cellulose and cellobiose
Keywords: CAZYmes; Glycoside hydrolases; Cellulosome; Secretome; iTRAQ; 2D HPLC-MS/MS
iTRAQ-based proteomic analysis of combination therapy with taurine, epigallocatechin gallate, and genistein on carbon tetrachloride-induced liver fibrosis in rats
Keywords: ALT; alanine aminotransferase; AST; aspartate transaminase; BP; biological process; CC; cellular component; CCl4; carbon tetrachloride; DAVID; database for annotation, visualization, and integrated discovery; ECM; extracellular matrix; EGCG; epigallocatec
Integrated transcriptomic and proteomic analyses uncover regulatory roles of Nrf2 in the kidney
Keywords: iTRAQ; Keap1; Nrf2; oxidative stress; ROS;
Quantitative proteomic analysis of sub-MIC erythromycin inhibiting biofilm formation of S. suis in vitro
Keywords: S. suis; Streptococcus suis; QS; Quorum sensing; MICs; the minimum inhibitory concentrations; SEM; scanning electron microscopy; SCX; Strong Cation Exchange; CBD; Calgary Biofilm Device; TCP assay; crystal violet; Proteomics; S. suis; Biofilms; Erythromyc
Quantitative proteome analysis of Caenorhabditis elegans upon exposure to nematicidal Bacillus thuringiensis
Keywords: Innate immune system; iTRAQ; High pH reversed-phase chromatography; Mass spectrometry; Model organism; Proteomics;
Transcriptome and proteome analysis of Eucalyptus infected with Calonectria pseudoreteaudii
Keywords: Eucalyptus; Cylindrocladium leaf blight; Defense pathways; Defense related gene; iTRAQ; RNA-seq;
iTRAQ-based quantitative proteomic analysis of Pseudomonas aeruginosa SJTD-1: A global response to n-octadecane induced stress
Keywords: iTRAQ; Proteomics; Pseudomonas aeruginosa SJTD-1; n-Octadecane
iTRAQ-based quantitative proteomics analysis of Brassica napus leaves reveals pathways associated with chlorophyll deficiency
Keywords: Chlorophyll deficiency; Photosynthesis; Brassica napus; iTRAQ; Proteomics; Leaf proteome;
MicroRNA-7 activates Nrf2 pathway by targeting Keap1 expression
Keywords: ARE; antioxidant response elements; CNC; Cap 'n' Collar; CBA; coumarin boronic acid; GCLM; glutamate-cysteine ligase modifier subunit; eGFP; enhanced green fluorescent protein; HO-1; heme oxygenase 1; iTRAQ; Isobaric tags for relative and absolute qua
Effects of heavy metals on Cyanothece sp. CCY 0110 growth, extracellular polymeric substances (EPS) production, ultrastructure and protein profiles
Keywords: Cyanobacteria; Cyanothece; Extracellular polymeric substances (EPS); Heavy metals; iTRAQ; Proteome;
Acupuncture targeting and regulating multiple signaling pathways related to Zusanli acupoint using iTRAQ-based quantitative proteomic analysis
Keywords: iTRAQ; Proteomics; Metabolism pathways; Proteins; Acupuncture
Multiple bio-analytical methods to reveal possible molecular mechanisms of developmental toxicity in zebrafish embryos/larvae exposed to tris(2-butoxyethyl) phosphate
Keywords: Q51; Q53; Q56Developmental toxicity; Zebrafish; iTRAQ; Flame retardants; TBEP
Bile carcinoembryonic cell adhesion molecule 6 (CEAM6) as a biomarker of malignant biliary stenoses
Keywords: PAC; pancreatic adenocarcinoma; CC; cholangiocarcinoma; CP; chronic pancreatitis; BS; bile stones; EUS-FNA; endoscopic ultrasound-guided fine needle aspiration; ERCP; endoscopic retrograde cholangiopancreatography; Pancreatic cancer; Cholangiocarcinom
iTRAQ-based proteomic study of the effects of Spiroplasma eriocheiris on Chinese mitten crab Eriocheir sinensis hemocytes
Keywords: Spiroplasma eriocheiris; Eriocheir sinensis; Hemocytes; iTRAQ; Proteomics;
Molecular and cellular pharmacologyMitochondrial protein targets of radiosensitisation by 1,8-dihydroxy-3-acetyl-6-methyl-9,10 anthraquinone on nasopharyngeal carcinoma cells
Keywords: 1,8-dihydroxy-3-acetyl-6-methyl-9,10 anthraquinone; Nasopharyngeal carcinoma (NPC); iTRAQ; Radiosensitisation; Mitochondrial proteins; Bioinformatics;
Bioactives from Artemisia dracunculus L. enhance insulin sensitivity via modulation of skeletal muscle protein phosphorylation
Keywords: Skeletal muscle; Insulin resistance; Botanicals; Quantitative phosphoproteomics; iTRAQ
Quantitative phosphoproteomic analysis of host responses in human lung epithelial (A549) cells during influenza virus infection
Keywords: Influenza A virus; Quantitative phosphoproteomics; Host cell response; LC-MS/MS; iTRAQ;
Increased Serpin A5 levels in the cervicovaginal fluid of HIV-1 exposed seronegatives suggest that a subtle balance between serine proteases and their inhibitors may determine susceptibility to HIV-1 infection
Keywords: CAN; acetonitrile; ARV; antiretroviral; BCA; bicinchoninic acid assay; BV; bacterial vaginosis; CI; confidence interval; CVF; cervicovaginal fluid; FA; formic acid; FC; fold change; HESNs; HIV-1 exposed seronegative individuals; HIV; human immunodeficienc
High-throughput quantitation of amino acids in rat and mouse biological matrices using stable isotope labeling and UPLC-MS/MS analysis
Keywords: Amino acids; Quantitation; UPLC; MS/MS; iTRAQ; Isotope labeling;
iTRAQ-based quantitative proteomic analyses on the gender-specific responses in mussel Mytilus galloprovincialis to tetrabromobisphenol A
Keywords: Tetrabromobisphenol A; Toxicological effects; Mytilus galloprovincialis; iTRAQ; Proteomics