Keywords: RSCU، استفاده از کدون نسبی مترادف; RABV, rabies virus; G, glycoprotein; RSCU, Relative synonymous codon usage; Nc, effective number of codon; V, aliphatic index; CAI, Codon adaptive index; GRAVY, Grand average hydropathy; COA, Correspondence analysisMutational pressure; Aromaticity; Alipha
مقالات ISI RSCU، استفاده از کدون نسبی مترادف (ترجمه نشده)
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Keywords: RSCU، استفاده از کدون نسبی مترادف; DOR, dinucleotide odds ratio; GC3S, frequency of G + C at the third position of synonymous codons; HI, homology-independent; HD, homology-dependent; ORF, open reading frame; RSCU, relative synonymous codon usage; NC, effective number of codons; NC′, effec
The complete mitochondrial genomes of two Atlantic spiny rats, genus Trinomys (Rodentia: Echimyidae), from low-pass shotgun sequencing
Keywords: RSCU، استفاده از کدون نسبی مترادف; A, adenosine; bp, base pair(s); C, cytidine; cytb, cytochrome b; G, guanosine; ML, maximum likelihood; mt, mitochondrial; N, any nucleoside; PCGs, protein coding genes; rRNA, ribosomal RNA; RSCU, relative synonymous codon usage; T, thymidine; tRNA, transf
Cytochrome P450 genes in coronary artery diseases: Codon usage analysis reveals genomic GC adaptation
Keywords: RSCU، استفاده از کدون نسبی مترادف; CAD, Coronary artery disease; CVD, Cardiovascular diseases; CYP, Cytochrome P450; CUB, Codon usage bias; CAI, Codon adaptation index; Nc, Effective number of codon; RSCU, Relative synonymous codon usage; PCA, Principle component analysis; SCUO, Synonymous
Codon usage trend in mitochondrial CYB gene
Keywords: RSCU، استفاده از کدون نسبی مترادف; MT-CYB, mitochondrial cytochrome b gene; RSCU, relative synonymous codon usage; CAI, codon adaptation index; ENC, effective number of codonCodon usage; MT-CYB gene; Mutation pressure; Natural selection; Pisces; Aves; Mammals
Shotgun assembly of the assassin bug Brontostoma colossus mitochondrial genome (Heteroptera, Reduviidae)
Keywords: RSCU، استفاده از کدون نسبی مترادف; bp, base pair(s); CR, control region; CSB, conserved sequence block; IGS, intergenic spacer; ML, maximum-likelihood; NGS, next generation sequencing; PCG, protein-coding genes; rRNA, ribosomal RNA; RSCU, relative synonymous codon usage; tRNA, transfer RNA
GENETIC CODE REDUNDANCY AND ITS INFLUENCE ON THE ENCODED POLYPEPTIDES
Keywords: RSCU، استفاده از کدون نسبی مترادف; A, adenine; A site, aminoacyl tRNA site; aa-tRNA, aminoacyl tRNA; C, cytosine; E site, exit site; EF-G, elongation factor G; EF-Tu, elongation factor Tu; G, guanine; N, nucleoside; P site, peptidyl tRNA site; RSCU, relative synonymous codon usage; Tm, mel
Genomic characteristics comparisons of 12 food-related filamentous fungi in tRNA gene set, codon usage and amino acid composition
Keywords: RSCU، استفاده از کدون نسبی مترادف; A, adenosine; C, cytidine; G, guanosine; RSCU, Relative synonymous codon usage; T, thymidine; tRNA, transfer RNA; U, uridineFilamentous fungi; Food; tRNA gene; Codon usage; Amino acid composition
Selective constraints in yeast genes with differential expressivity: Codon pair usage and mRNA stability perspectives
Keywords: RSCU، استفاده از کدون نسبی مترادف; HMHP, high mRNA high protein; LMHP, low mRNA high protein; HMLP, high mRNA low protein; LMLP, low mRNA low protein; RSCU, relative synonymous codon usage; CPS, codon pair scoresSaccharomyces cerevisiae; tRNA abundance; mRNA expression level; Codon pair; m
Selected codon usage bias in members of the class Mollicutes
Keywords: RSCU، استفاده از کدون نسبی مترادف; GC, molar content of guanine + cytosine; HEGs, highly expressed genes; RSCU, relative synonymous codon usage; WCA, within group correspondence analysis; MELP, MILC-based expression level predictor; MILC, measure independent of length and composition; dS,
Analysis of the genome and proteome composition of Bdellovibrio bacteriovorus: Indication for recent prey-derived horizontal gene transfer
Keywords: RSCU، استفاده از کدون نسبی مترادف; CAI, Codon adaptation index; COA, Correspondence analysis; RSCU, Relative synonymous codon usage; RAAU, Relative amino acid usage; HEG, Highly expressed genes; LEG, Lowly expressed genes; GRAVY, Average hydropathy; HGT, Horizontal gene transfer; CSAP, Cel
Characteristics of codon usage bias in two regions downstream of the initiation codons of foot-and-mouth disease virus
Keywords: RSCU، استفاده از کدون نسبی مترادف; AA, amino acid; CUB, codon usage bias; FMDV, foot-and-mouth disease virus; IRES, internal ribosomal entry site; Lpro, Leader proteinase; RSCU, relative synonymous codon usage; SAT 1, South African Territories 1; SAT 2, South African Territories 2; SAT 3,
A detailed comparative analysis on the overall codon usage pattern in herpesviruses
Keywords: RSCU، استفاده از کدون نسبی مترادف; ENc, effective number of codons; CoA, correspondence analysis; ORF, open reading frame; RSCU, relative synonymous codon usage; WCA, within group correspondence analysis; AF, absolute codon frequencyHerpesvirus; Codon usage bias; Correspondence analysis; G
Comparative genomics of human-like Schistosoma japonicum genes indicates a putative mechanism for host–parasite relationship
Keywords: RSCU، استفاده از کدون نسبی مترادف; EST, expressed sequence tags; HGT, horizontal gene transfer; PMB, probability matrix from blocks; RSCU, relative synonymous codon usage; CDS, coding sequence; ORF, open reading frame; NR protein database, Non-Redundant database; NJ algorithm, neighbor-joi
Analysis of synonymous codon usage in 11 Human Bocavirus isolates
Keywords: RSCU، استفاده از کدون نسبی مترادف; bp, base pair; HBoV, Human Bocavirus; RSCU, relative synonymous codon usage; ENC, effective number of codons; COA, correspondence analysis; GC3S, the frequency of G + C at the synonymous third position of sense codons; A3S, T3S, G3S and C3S, the adenine,
Insight in to the phylogeny of polyhydroxyalkanoate biosynthesis: Horizontal gene transfer
Keywords: RSCU، استفاده از کدون نسبی مترادف; HGT, Horizontal gene transfer; PHA, polyhydroxyalkanoates; PHB, polyhydroxybutyrate; RSCU, Relative Synonymous Codon Usage; BV, Bootstrap value; CAI, Codon Adaptation Index.Polyhydroxybutyrate; Phylogenetic analysis; Lateral gene transfer; P(3HB) polymera
Comparative codon and amino acid composition analysis of Tritryps-conspicuous features of Leishmania major
Keywords: RSCU، استفاده از کدون نسبی مترادف; ORF, Open reading frame; RSCU, relative synonymous codon usage; CAI, codon adaptation index; RAAU, relative amino acid usage; GC3S, G + C content at synonymous codon sites excluding ATG for Met and TGG for Trp; GC12, G + C content at first and second codo
Synonymous codon usage in adenoviruses: Influence of mutation, selection and protein hydropathy
Keywords: RSCU، استفاده از کدون نسبی مترادف; RSCU, relative synonymous codon usage; COA, correspondence analysis; Nc, effective number of codons; GC1+2, frequency of G + C at first and second codon positions; GC3S, frequency of G + C at synonymous third codon positions; N3S, frequency of base N at s