کد مقاله کد نشریه سال انتشار مقاله انگلیسی نسخه تمام متن
1192888 1492302 2011 10 صفحه PDF دانلود رایگان
عنوان انگلیسی مقاله ISI
Structure of singly hydrated, protonated phospho-tyrosine
موضوعات مرتبط
مهندسی و علوم پایه شیمی شیمی آنالیزی یا شیمی تجزیه
پیش نمایش صفحه اول مقاله
Structure of singly hydrated, protonated phospho-tyrosine
چکیده انگلیسی

Tandem mass spectrometry is a powerful analytical technique for distinguishing phosphorylated from non-phosphorylated peptides, and also to locate the phosphorylated site. It is however desirable to further extend the tandem MS capacities via the development of structure specific activation techniques. This work is part of an ongoing project which aims at characterizing the environment of the phosphate group using tunable IRMPD. The effect of microsolvation of protonated phospho-tyrosine on the phosphate environment has been investigated using a combination of tandem MS experiments and quantum chemical calculations. Infrared spectra have been recorded in the 900–1900 cm−1 and 2500–3750 cm−1 regions using a free electron laser and a tabletop laser, respectively. Water is found to form a hydrogen bonded bridge between the otherwise nearly isolated phosphate and ammonium groups. Theoretical and experimental results also provide consistent evidences for two weaker hydrogen bonds between the two other NH bonds with the π-aromatic ring and the carboxylic CO. The MP2 calculated IR absorption spectrum of the lowest energy structure allows for a clear band assignment. As compared to intramolecular direct interaction between the phosphate and the ammonium, the two hydrogen bonds associated with the water bridge between these groups are found to have a larger impact on their IR structure-specific probes. This is reflected by the red-shift of the PO stretch, and also the blue shift of the umbrella mode of the ammonium. Special attention is paid to the 2500–3750 cm−1 spectral range. While the phosphate OH stretching modes are not affected by the addition of water, the red shifts of the three ammonium NH stretches are found to be significant and quite different for their three types of non-covalent interactions.

Figure optionsDownload high-quality image (140 K)Download as PowerPoint slideHighlights
► We use IRMPD spectroscopy in both the fingerprint and X–H stretching regions.
► We compare the spectra of singly hydrated and bare phosphorylated tyrosine.
► MP2 quantum calculations are used to assign structures based on IR spectra.
► Water bridges between the amino acid and phosphate functions.

ناشر
Database: Elsevier - ScienceDirect (ساینس دایرکت)
Journal: International Journal of Mass Spectrometry - Volume 308, Issues 2–3, 1 December 2011, Pages 338–347
نویسندگان
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