کد مقاله کد نشریه سال انتشار مقاله انگلیسی نسخه تمام متن
2815511 1159874 2015 9 صفحه PDF دانلود رایگان
عنوان انگلیسی مقاله ISI
Genome-wide analysis of the MYB gene family in physic nut (Jatropha curcas L.)
موضوعات مرتبط
علوم زیستی و بیوفناوری بیوشیمی، ژنتیک و زیست شناسی مولکولی ژنتیک
پیش نمایش صفحه اول مقاله
Genome-wide analysis of the MYB gene family in physic nut (Jatropha curcas L.)
چکیده انگلیسی


• A total of 125 JcMYB genes were identified in the physic nut genome.
• The MYB genes were classified into nine groups and the MVIII group was one of the most ancient MYB types.
• There was recent gene tandem duplication of MYB genes in the physic nut genome.
• Thirty-four JcMYB genes responded to the tested abiotic stress.
• Over-expression of the JcMYB001 gene in Arabidopsis increased its sensitivity to drought and salinity stresses.

The MYB proteins comprise one of the largest transcription factor families in plants, and play key roles in regulatory networks controlling development, metabolism, and stress responses. A total of 125 MYB genes (JcMYB) have been identified in the physic nut (Jatropha curcas L.) genome, including 120 2R-type MYB, 4 3R-MYB, and 1 4R-MYB genes. Based on exon–intron arrangement of MYBs from both lower (Physcomitrella patens) and higher (physic nut, Arabidopsis, and rice) plants, we can classify plant MYB genes into ten groups (MI–X), except for MIX genes which are nonexistent in higher plants. We also observed that MVIII genes may be one of the most ancient MYB types which consist of both R2R3- and 3R-MYB genes. Most MYB genes (76.8% in physic nut) belong to the MI group which can be divided into 34 subgroups. The JcMYB genes were nonrandomly distributed on its 11 linkage groups (LGs). The expansion of MYB genes across several subgroups was observed and resulted from genome triplication of ancient dicotyledons and from both ancient and recent tandem duplication events in the physic nut genome. The expression patterns of several MYB duplicates in the physic nut showed differences in four tissues (root, stem, leaf, and seed), and 34 MYB genes responded to at least one abiotic stressor (drought, salinity, phosphate starvation, and nitrogen starvation) in leaves and/or roots based on the data analysis of digital gene expression tags. Overexpression of the JcMYB001 gene in Arabidopsis increased its sensitivity to drought and salinity stresses.

ناشر
Database: Elsevier - ScienceDirect (ساینس دایرکت)
Journal: Gene - Volume 572, Issue 1, 1 November 2015, Pages 63–71
نویسندگان
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