کد مقاله | کد نشریه | سال انتشار | مقاله انگلیسی | نسخه تمام متن |
---|---|---|---|---|
5906255 | 1159967 | 2013 | 7 صفحه PDF | دانلود رایگان |
عنوان انگلیسی مقاله ISI
Identification and expression analysis of a new glycoside hydrolase family 55 exo-β-1,3-glucanase-encoding gene in Volvariella volvacea suggests a role in fruiting body development
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کلمات کلیدی
CTABITRAQTPMDGEORFcDNA - cDNADNA complementary to RNA - DNA مکمل RNAq-PCR - Q-PCRamino acid - آمینو اسیدisobaric tags for relative and absolute quantification - برچسب های ایزوباریک برای اندازه گیری نسبی و مطلقdigital gene expression - بیان ژن دیجیتالReal time quantitative PCR - زمان واقعی PCR کمیgene identification - شناسایی ژنopen reading frame - قاب خواندن بازEdible fungi - قارچ خوراکیMaturation stage - مرحله بلوغexpression profile - مشخصات بیانHexadecyl trimethyl ammonium bromide - هگزادیدیل ترتیب متیل آمونیوم برمیدCdS - کادمیم سولفید، سولفید کادمیم
موضوعات مرتبط
علوم زیستی و بیوفناوری
بیوشیمی، ژنتیک و زیست شناسی مولکولی
ژنتیک
پیش نمایش صفحه اول مقاله

چکیده انگلیسی
The edible straw mushroom Volvariella volvacea is an important crop in South East Asia and is predominantly harvested in the egg stage. Rapid stipe elongation and cap expansion result in a swift transition from the egg to elongation and maturation stage, which are subjected to fast senescence and deterioration. In other mushrooms, β-1,3-glucanases have been associated with degradation (softening) of the cell wall during stipe elongation and senescence. We present a new glycoside hydrolase family 55 (GH55) exo-β-1,3-glucanase gene, exg2, and highly conserved deduced EXG2 protein. The 3D model and presumed catalytic residues of V. volvacea EXG2 are identical to Lentinula edodes EXG2 and Phanerochaete chrysosporium Lam55A, supporting similar enzymatic functions. In addition to previous association to stipe elongation and senescence, our data clearly indicates a role for cap (pileus) expansion. Digital gene expression, quantitative PCR and isobaric tags for relative and absolute quantification analysis showed low exg2 and EXG2 levels in primordia, button, egg and elongation stages and significantly increased levels in the maturation stage. Subsequent relative quantitative PCR analysis designated expression of exg2 to the stipe in the elongation stage and to the pileus and stipe in the maturation stage. EXG2 cell wall softening activity, close correlation of exg2 expression with the principal expanding mushroom tissues and a strong conservation of expression patterns and protein sequences in other mushrooms, make V. volvacea exg2 an important candidate for future studies on mechanisms of fruiting body expansion and senescence causing commodity value loss.
ناشر
Database: Elsevier - ScienceDirect (ساینس دایرکت)
Journal: Gene - Volume 527, Issue 1, 15 September 2013, Pages 154-160
Journal: Gene - Volume 527, Issue 1, 15 September 2013, Pages 154-160
نویسندگان
Yongxin Tao, Baogui Xie, Zhiyun Yang, Zhihong Chen, Bingzhi Chen, Youjin Deng, Yuji Jiang, Arend F. van Peer,