Genetic characterisation of Fasciola gigantica from Ghana
Keywords: Fasciola gigantica; Fascioliasis; Food-borne trematodes; Ghana; mtDNA nad1; 28S rRNA;
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On the systematics of some marine haploporids (Trematoda) with the description of a new species of Megasolena Linton, 1910
Keywords: Haploporidae; Phylogeny; Cadenatella; Hapladena; ITS region; 28S rRNA;
Morphological and molecular characterization of Isospora manorinae n. sp. in a yellow-throated miner (Manorina flavigula wayensis) (Gould, 1840)
Keywords: Isospora; Yellow-throated miner; Morphology; Phylogeny; 18S rRNA; 28S rRNA; COI
Morphological and molecular characterization of Isospora neochmiae n. sp. in a captive-bred red-browed finch (Neochmia temporalis) (Latham, 1802)
Keywords: Isospora; Red-browed finch; Morphology; Phylogeny; 18S rRNA; 28S rRNA; COI; hsp70;
Reference gene selection for quantitative real-time PCR in Solanum lycopersicum L. inoculated with the mycorrhizal fungus Rhizophagus irregularis
Keywords: Arbuscular mycorrhizal fungi; qPCR; Reference genes; EF1; elongation factor 1 α; GAPDH; glyceraldehyde-3-phosphate dehydrogenase; PGK; phosphoglycerate kinase; PP2Acs; protein phosphatase 2A; RPL2; ribosomal protein L2; TUB; β-tubulin; UBI; ubiquitin; A
Eimeria collieie n. sp. (Apicomplexa:Eimeriidae) from the western long-necked turtle (Chelodina colliei)
Keywords: Eimeria collieie n. sp; Morphology; Genetic characterisation; 18S rRNA; 28S rRNA; Mitochrondial cytochrome oxidase gene (COI);
Isospora streperae n. sp. (Apicomplexa: Eimeriidae) from a grey currawong (Strepera versicolour plumbea) (Passeriformes: Artamidae) in Western Australia
Keywords: Isospora; Grey currawong; Morphology; Phylogeny; 18S rRNA; 28S rRNA; COI;
Isospora serinuse n. sp. (Apicomplexa: Eimeriidae) from a domestic canary (Serinus canaria forma domestica) (Passeriformes: Fringillidae) in Western Australia
Keywords: Isospora; Domestic canary; Morphology; Phylogeny; 18S rRNA; 28S rRNA; COIa; COIb;
Haliotrematoides spp. (Monogenoidea: Dactylogyridae) parasitizing Lutjanus guttatus (Lutjanidae) in two localities of the Pacific coast of Mexico, and their phylogenetic position within the Ancyrocephalinae through sequences of the 28S rRNA
Keywords: Euryhaliotrema; 28S rRNA gene; Cryptic species; Mexico; Monogenea; SnapperEuryhaliotrema; 28S rRNA; Especies crípticas; México; Monogenea; Pargo
A revision of the genus Paracanthonchus (Cyatholaimidae, Nematoda) with a tabular key to species and a description of P. mamubiae sp. n. from the deep North-Western Pacific
Keywords: 18S rRNA; 28S rRNA; Cyatholaimidae; Deep-sea; New species; Kuril–Kamchatka Trench; Taxonomy; Pacific; Paracanthonchus; SEM; Tabular key; Zenkevich Rise; Zoogeography
A new Caryospora coccidian species (Apicomplexa: Eimeriidae) from the laughing kookaburra (Dacelo novaeguineae)
Keywords: 18S rRNA; 28S rRNA; Besnoitia; Caryospora; Kookaburra; Morphology; Phylogenetics
Isospora anthochaerae n. sp. (Apicomplexa: Eimeriidae) from a Red wattlebird (Anthochaera carunculata) (Passeriformes: Meliphagidae) in Western Australia
Keywords: Isospora; Red wattlebird; Morphology; Phylogeny; ITS rRNA; 18S rRNA; 28S rRNA; COI
Further insights into the phylogeny of two ciliate classes Nassophorea and Prostomatea (Protista, Ciliophora)
Keywords: Ciliophora; Phylogeny; 18S rRNA; 28S rRNA; Nassophorea; Prostomatea;
Fasciola hepatica - Where is 28S ribosomal RNA?
Keywords: Fasciola hepatica; Microfluidics capillary based electrophoresis; 28S rRNA; RIN number; RNA quality;
Positioning of CCA-arms of the A- and the P-tRNAs towards the 28S rRNA in the human ribosome
Keywords: 80S ribosomes tRNA binding sites; CCA-end localization; 4-Thiouridine photocross-linking; 28S rRNA; Hydroxyl radical footprinting;
DNA barcodes for marine fungal identification and discovery
Keywords: Barcoding gap; DNA barcode; Internal transcribed spacer; Species boundary; 5.8S rRNA; 18S rRNA; 28S rRNA;
Phylogenetic analysis of the mitochondrial genomes and nuclear rRNA genes of ticks reveals a deep phylogenetic structure within the genus Haemaphysalis and further elucidates the polyphyly of the genus Amblyomma with respect to Amblyomma sphenodonti and A
Keywords: Ixodida; Phylogeny; Mitochondrial genomes; 18S rRNA; 28S rRNA; Haemaphysalis; Amblyomma
Phylogenetic analysis of ticks (Acari: Ixodida) using mitochondrial genomes and nuclear rRNA genes indicates that the genus Amblyomma is polyphyletic
Keywords: Ixodida; Phylogeny; Mitochondrial genomes; 18S rRNA; 28S rRNA; Amblyomma; Polyphyly;
28S-ribosomal RNA is superior to glyceraldehyde-3-phosphate dehydrogenase as a RNA reference gene in p53-deficient mice with unilateral ureteral obstruction
Keywords: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH); 28S rRNA; Reference gene; Unilateral ureteral obstruction (UUO); p53-deficient mice
Molecular phylogeny of Pholadoidea Lamarck, 1809 supports a single origin for xylotrophy (wood feeding) and xylotrophic bacterial endosymbiosis in Bivalvia
Keywords: 18S rRNA; 28S rRNA; Bacterial endosymbiosis; Bivalvia; Evolution; Pholadidae; Phylogeny; Shipworms; Symbiosis; Teredinidae; Wood-boring; Xylophagainae; Xylotrophy
DNA barcoding of endoparasitoid wasps in the genus Anicetus reveals high levels of host specificity (Hymenoptera: Encyrtidae)
Keywords: Hymenoptera; Encyrtidae; Anicetus; ceroplastis species group; DNA barcoding; mtDNA; 28S rRNA; DNA sequences; Taxonomy; Host specificity; Ceroplastes; Coccidae
Development of a co-culture model for in vitro toxicological studies in Atlantic salmon
Keywords: Hepatocytes; Monocytes; 28S rRNA; Co-culture; In vitro; Atlantic salmon
Recent vicariant and dispersal events affecting the phylogeny and biogeography of East Asian freshwater crab genus Nanhaipotamon (Decapoda: Potamidae)
Keywords: Nanhaipotamon; Freshwater crabs; Phylogeny; 16S rRNA; COI; 28S rRNA; Vicariance; Dispersal;
Incongruence between molecular phylogeny and morphological classification in amphipod crustaceans: A case study of Antarctic lysianassoids
Keywords: Molecular phylogeny; Amphipoda; Lysianassoidea; Southern Ocean; COI; 28S rRNA
Muscodor fengyangensis sp. nov. from southeast China: morphology, physiology and production of volatile compounds
Keywords: Antimicrobial activity; ITS rRNA; Muscodor; Optimum growth temperature; rpb2; 28S rRNA; tub1; Volatile metabolites
Nearly complete rRNA genes assembled from across the metazoan animals: Effects of more taxa, a structure-based alignment, and paired-sites evolutionary models on phylogeny reconstruction
Keywords: 28S rRNA; Ribosomal rRNA genes; Metazoa; Ecdysozoa; Molecular phylogeny; Secondary structure; PHASE program
Phylogenetic and morphometric differentiation reveal geographic radiation and pseudo-cryptic speciation in a mangrove crab from the Indo-West Pacific
Keywords: Neosarmatium meinerti; 16S rRNA; CoxI; 28S rRNA; Radiation; Biodiversity; Larval dispersal
First molecular estimate of cyclostome bryozoan phylogeny confirms extensive homoplasy among skeletal characters used in traditional taxonomy
Keywords: Bryozoa; Cyclostomata; Phylogeny; ssrDNA; 18S rRNA; lsrDNA; 28S rRNA
Molecular phylogenetics of Triculine snails (Gastropoda: Pomatiopsidae) from southern China
Keywords: Molecular phylogenetics; Triculinae; 16S rRNA; 28S rRNA; COI
Molecular phylogeny and historical biogeography of the Holarctic wetland leaf beetle of the genus Plateumaris
Keywords: 28S rRNA; Chrysomelidae; Dispersal; Divergence time; Mitochondrial gene; Vicariance
Starting to unravel the toxoglossan knot: Molecular phylogeny of the “turrids” (Neogastropoda: Conoidea)
Keywords: 18S rRNA; 28S rRNA; Classification; COI gene; Conoidea; Conidae; H3 gene; Molecular phylogeny; Toxoglossa; Turridae; West Pacific
A phylogenetic framework for root lesion nematodes of the genus Pratylenchus (Nematoda): Evidence from 18S and D2–D3 expansion segments of 28S ribosomal RNA genes and morphological characters
Keywords: 18S rRNA; 28S rRNA; Ancestral state reconstruction; Bayes factor; Bayesian inference; Congruence; Data partitions; DNA barcoding; Doublet model; Morphology; Phylogeny; Secondary structure base alignment; SEM
Combined mitochondrial and nuclear sequences support the monophyly of forcipulatacean sea stars
Keywords: 12S rRNA; 16S rRNA; 18S rRNA; 28S rRNA; Cytochrome oxidase subunit I; tRNA; Forcipulatida; Brisingida; Sea star;
Morphological and molecular differentiation between Dicrocoelium dendriticum (Rudolphi, 1819) and Dicrocoelium chinensis (Sudarikov and Ryjikov, 1951) Tang and Tang, 1978 (Platyhelminthes: Digenea)
Keywords: Dicrocoelium dendriticum; Dicrocoelium orientalis; Dicrocoelium chinensis; Dicrocoelium hospes; 18S rRNA; 28S rRNA; ITS rRNA; rDNA; Xiphidiata; Plagiorchiida; Digenea
Molecular phylogenetics in Hydra, a classical model in evolutionary developmental biology
Keywords: Molecular phylogeny; Hydrozoa; Hydra; 18S rRNA; 28S rRNA; 16S rRNA; COI; Mitochondrial DNA
Added resolution among ordinal level relationships of tapeworms (Platyhelminthes: Cestoda) with complete small and large subunit nuclear ribosomal RNA genes
Keywords: Cestoda; Tapeworms; Tetraphyllidea; Phylogeny; ssrDNA; 18S rRNA; lsrDNA; 28S rRNA
Phylogeny of parasitiform mites (Acari) based on rRNA
Keywords: 18S rRNA; 28S rRNA; Acari; Parasitiformes; Evolutionary rates
A molecular phylogeny of the genus Gammarus (Crustacea: Amphipoda) based on mitochondrial and nuclear gene sequences
Keywords: Gammarus; Molecular phylogeny; COI; 16S rRNA; 18S rRNA; 28S rRNA; Phylogeography
Ribosomal RNA genes and deuterostome phylogeny revisited: More cyclostomes, elasmobranchs, reptiles, and a brittle star
Keywords: 28S rRNA; Ribosomal RNA genes; Molecular phylogeny; Ambulacraria; Asterozoa; Chordata; Vertebrata; Hexanchformes; Parametric bootstrapping
Phylogenetic relationships among species groups of the ant genus Myrmecia
Keywords: Myrmecia ants; Nothomyrmecia ants; Molecular phylogeny; Nuclear DNA sequences; 28S rRNA; Long-wave opsin
Molecular phylogeny of the Branchiopoda (Crustacea)–Multiple approaches suggest a ‘diplostracan’ ancestry of the Notostraca
Keywords: Branchiopoda; Molecular; Phylogeny; Evolution; 16S rRNA; 28S rRNA; Bayesian; Likelihood; Parsimony
HSP70 gene expression in Mytilus galloprovincialis hemocytes is triggered by moderate heat shock and Vibrio anguillarum, but not by V. splendidus or Micrococcus lysodeikticus
Keywords: Heat shock; HSP70; 28S rRNA; Gene expression; Real-time PCR; Q-PCR; Mussel; Immune response; Phylogeny; Molluscs; Mytilus; Vibrio splendidus; Vibrio anguillarum; Micrococcus lysodeikticusaa, amino acids; AMP, antimicrobial peptide; HSP70, heat shock prote
A multigene framework for polychaete phylogenetic studies
Keywords: Basal polychaetes; Rooting; 28S rRNA; U2 snRNA; Histone H3; Cytochrome c oxidase
Higher phylogeny of zygaenid moths (Insecta: Lepidoptera) inferred from nuclear and mitochondrial sequence data and the evolution of larval cuticular cavities for chemical defence
Keywords: Zygaenoidea; ND1; Mt tRNA-LeuCUN; Mt tRNA-Val; 16S rRNA; 18S rRNA; 28S rRNA; Secondary structure models; Bayes factors; Doublet substitution models; Partition specific substitution models; Character evolution
Further use of nearly complete 28S and 18S rRNA genes to classify Ecdysozoa: 37 more arthropods and a kinorhynch
Keywords: 28S rRNA; Ribosomal RNA genes; Molecular phylogeny; Arthropoda; Crustacea; Hexapoda; Kinorhyncha; Covarion model; Parametric bootstrapping