Keywords: cpDNA; Plants; SPInDel; Species identification; Forensic botany;
مقالات ISI (ترجمه نشده)
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Keywords: tRNAs; transfer RNAs; cpDNA; chloroplast DNA; MYA; million years ago; Cp; chloroplast; Indel; insertion and deletion; PCR; polymerase chain reaction; IR; inverted repeat; SSC region; small single-copy region; LSC region; large single-copy region; ML; maxi
Keywords: cpDNA; Genetic variation; Phylogeography; Population structure; Pinus sylvestris
Entire industrial chain botanical origin authenticity control of ginseng formula granule products using simple PCR-based identification
Keywords: rDNA; ribosomal DNA; bp; base pair; CHM; Chinese herbal medicine; SNP; single nucleotide polymorphism; COXI; cytochrome c oxidase subunit I; ITS; internal transcribed spacer; CTAB; cetyltrimethylammonium bromide; mtDNA; mitochondrial DNA; cpDNA; chloropla
Genetic variability of Eurasian Nuphar species unravels possible routes in which freshwater plants could fill their wide areas
Keywords: cpDNA; Area disjunction; Homoploid speciation; Fossils; Hybridization; ITS; Phylogeography; Taxonomy;
Comparative transcriptome profiling of genes and pathways involved in leaf-patterning of Clivia miniata var. variegata
Keywords: PET; Photosynthetic electron transport; Cmvv; Clivia miniata var. variegata; cpDNA; Chloroplast DNA; CTP; Chloroplast transit peptide; IR; Large inverted repeat; LSC; Large single copy regions; SSC; Small single copy regions; YSs; Yellow stripes of leaves
Hybridization and polyploidization within the Chenopodium album aggregate analysed by means of cytological and molecular markers
Keywords: Allopolyploidy; Chenopodium; cpDNA; FTL genes; Hybridization; nrDNA ITS;
The complete plastome sequence of Rubus takesimensis endemic to Ulleung Island, Korea: Insights into molecular evolution of anagenetically derived species in Rubus (Rosaceae)
Keywords: nrDNA; nuclear ribosomal DNA; cp; chloroplast; bp; base pairs; kb; kilobase; LSC; large single copy; SSC; small single copy; SSRs; simple sequence repeats; Myr; million years old; cpDNA; chloroplast DNA; SNPs; single nucleotide polymorphisms; ML; maximum
Illumina sequencing of the chloroplast genome of common ragweed (Ambrosia artemisiifolia L.)
Keywords: Illumina sequencing; Chloroplast genome; cpDNA; Common ragweed; Ambrosia artemisiifolia;
East-west divergence in central Brazilian Cerrado revealed by cpDNA sequences of a bird-dispersed tree species
Keywords: Byrsonima coccolobifolia; Cerrado; cpDNA; Malpighiaceae; Neotropical tree; Phylogeography;
Bidirectional natural hybridization between sympatric Ligularia vellerea and L. subspicata
Keywords: Ligularia; Natural hybridization; Introgression; cpDNA; ITS;
Species-level phylogeny, fruit evolution and diversification history of Geranium (Geraniaceae)
Keywords: AICc; Akaike information criterion corrected for sample size; ASR; ancestral state reconstruction; CP; carpel projection; cpDNA; chloroplast DNA; ESS; effective sampling size; ET; Erodium-type; IT; inoperative type; MCMC; Markov chain Monte Carlo; mrca; m
The taxonomic position of Corydalis parviflora Su & Lidén (Papaveraceae), a genetically distinct species: Evidence from cpDNA and nDNA sequences
Keywords: Corydalis; Corydalis parviflora; cpDNA; nDNA; Taxonomic position
Evaluation of chloroplast DNA markers for intraspecific identification of Phalaenopsis equestris cultivars
Keywords: AFLP; amplified fragment length polymorphism; CBOL; consortium for the barcode of life; cpDNA; chloroplast DNA; cpSSR; chloroplast DNA simple sequence repeat; InDel; insertion and deletion; ML; maximum likelihood; NJ; neighbor-joining; nrITS; internal tra
Development of species-specific environmental DNA (eDNA) markers for invasive aquatic plants
Keywords: eDNA; Environmental DNA; cpDNA; Invasive aquatic plants; DNA barcoding; matK; rbcL; trnH–psbA
Genetic diversity and genetic structure of Corydalis tomentella Franch. (Papaveraceae), an endangered herb species from Central China
Keywords: Genetic diversity; Genetic structure; Corydalis tomentella Franch; nDNA; cpDNA
Mountains and refuges: Genetic structure and evolutionary history in closely related, endemic Centaurea in continental Greece
Keywords: Centaurea; cpDNA; Diversification; Glacial refugia; Microsatellites; Phalolepis;
Evolution of Asparagus L. (Asparagaceae): Out-of-South-Africa and multiple origins of sexual dimorphism
Keywords: cpDNA; Sexual dimorphism; Infrageneric structure; Phylogeny; PHYC; Species complexes;
Molecular characterization of Lathyrus species using chloroplast DNA trnH-psbA
Keywords: cpDNA; Lathyrus L.; trnH-psbA; Phylogenetic relationships; Polymorphism; AFLP; Amplified Fragment Length Polymorphism; ISSR; Inter Simple Sequences Repeat; PCR; Polymerase Chain Reaction; RAPD; Random Amplified Polymorphic DNA; RFLP; Restriction Fragment
Chloroplast DNA sequence data provides new insights into genetic diversity and phylogenetic relationships of Tunisian apricot germplasm
Keywords: cpDNA; Genetic diversity; Haplotypic diversity; Prunus armeniaca L.; trnH–trnK intergenic spacer
The complete chloroplast genome sequence of Taxus chinensis var. mairei (Taxaceae): loss of an inverted repeat region and comparative analysis with related species
Keywords: aa; amino acid; ATP; adenosine triphosphate; BLAT; The BLAST-Like Alignment Tool; BLAST; Basic Local Alignment Search Tool; CDS; coding sequence; cp; chloroplast; cpDNA; chloroplast DNA; CRA; comparative repeat analysis; CST; chloroplast SSR type; DNase;
Phylogenetic analysis of Astragalus sect. Ammodendron (Fabaceae) based on nrDNA ITS and two cpDNAs, psbA-trnH and trnT-trnY sequences
Keywords: Astragalus; cpDNA; nrDNA ITS; Phylogeny; Sect. Ammodendron;
Phylogenetic analysis reveals multiple introductions of Cynodon species in Australia
Keywords: cpDNA; Speciation; Phylogenetics; Bermudagrass;
Evolutionary rates of commonly used nuclear and organelle markers of Arabidopsis relatives (Brassicaceae)
Keywords: atpB; ATP synthase beta subunit; rbcL; large subunit of the ribulose-bisphosphate carboxylase; cpDNA; chloroplast DNA; Adh; alcohol dehydrogenase; CHS; chalcone synthase; CTAB; cetyltrimethylammonium bromide; trnE; tRNA-Glu; trnT; tRNA-Thr; trnL; tRNA-Leu
Molecular phylogeny of Astragalus section Alopecuroidei (Fabaceae) and its allies based on nrDNA ITS and three cpDNAs, matK, trnT-trnY and trnH-psbA sequences
Keywords: Astragalus; sect. Alopecuroidei; sect. Laxiflori; sect. Astragalus; nrDNA ITS; cpDNA;
Large-scale phylogeography of the disjunct Neotropical tree species Schizolobium parahyba (Fabaceae-Caesalpinioideae)
Keywords: Neotropical rainforests; cpDNA; nrDNA; Phylogeographic structure; Forest tree;
Complete chloroplast genome sequence of Elodea canadensis and comparative analyses with other monocot plastid genomes
Keywords: AIC; Akaike information criterion; ATP; adenosine triphosphate; BI; Bayesian inference; cp; chloroplast; cpDNA; chloroplast DNA; CRA; comparative repeat analysis; CST; chloroplast SSR type; DNase; deoxyribonuclease; F; forward; +G; gamma distribution; +I;
Allopolyploid origin of highly invasive Centaurea stoebe s.l. (Asteraceae)
Keywords: Allopolyploidy; Centaurea maculosa; cpDNA; Flow cytometry; Invasion; ITS; Hybridization; Life history traits; nrDNA; Polyploidy;
Phylogenetic relationships in Myrceugenia (Myrtaceae) based on plastid and nuclear DNA sequences
Keywords: Blepharocalyx; cpDNA; ETS; ITS; Luma; Myrteae; Myrceugenia; South America;
Phenotypic variability and genetic structure in plum (Prunus domestica L.), cherry plum (P. cerasifera Ehrh.) and sloe (P. spinosa L.)
Keywords: Prunus domestica L.; Prunus cerasifera Ehrh.; Prunus spinosa L.; Structure analysis; Genetic diversity; cpDNA; SSR
Molecular phylogeny of Cypripedium (Orchidaceae: Cypripedioideae) inferred from multiple nuclear and chloroplast regions
Keywords: Cypripedium; cpDNA; nrDNA ITS; Phylogeny; Monophyletic; Paraphyletic
Genetic diversity in endangered Notopterygium forbesii Boissieu based on intraspecies sequence variation of chloroplast DNA and implications for conservation
Keywords: Genetic diversity; cpDNA; trnH-psbA; Notopterygium forbesii;
Phylogenetic Study of Mangifera laurina and its Related Species Using cpDNA trnL-F Spacer Markers
Keywords: Mangifera laurina var. Hiku; phylogentic; cpDNA; trnL-F intergenic spacer; progenitor
Silene patula (Siphonomorpha, Caryophyllaceae) in North Africa: A test of colonisation routes using chloroplast markers
Keywords: Phylogeography; cpDNA; Migration; Diversification; Herbarium specimens; Adaptation; Hotspot diversity; Messinian salinity crisis; trnH–psbA; trnS–trnG; rpl20–rps12
Livistona palms in Australia: Ancient relics or opportunistic immigrants?
Keywords: Biogeography; Ecological transitions; Bayesian phylogenetics; Maximum likelihood; Parsimony; Relaxed molecular clock dating; cpDNA; Malate synthase; Vicariance; Dispersal; Palms; Arecaceae
FSTFST in the cytonuclear system
Keywords: Cytonuclear disequilibrium; Population structure; Mating system; cpDNA; mtDNA
A plastid tree can bring order to the chaotic generic taxonomy of Rytidosperma Steud. s.l. (Poaceae)
Keywords: Bootstrap support; Chloroplast; cpDNA; Danthonioideae; Generic delimitation; Morphology; Phylogeny; Southern Hemisphere; Wallaby grass
Phylogeographic structure of the chloroplast DNA gene pool in North American Boechera – A genus and continental-wide perspective
Keywords: Boechera; Brassicaceae; cpDNA; Phylogeography; Hybridisation
Bayesian hypothesis testing supports long-distance Pleistocene migrations in a European high mountain plant (Androsace vitaliana, Primulaceae)
Keywords: AFLPs; cpDNA; Diversification age; ITS; Phylogeography
Phylogenetic relationships in the orchid genus Serapias L. based on noncoding regions of the chloroplast genome
Keywords: cpDNA; Floral size; Orchidaceae; Phylogeny; Serapias
Phylogeography of Japanese water crowfoot based on chloroplast DNA haplotypes
Keywords: Aquatic plant; cpDNA; Japanese archipelago; Phylogeography; Quaternary; Ranunculus
Genetic and morphologic variability of annual glassworts (Salicornia L.) from the Gulf of Trieste (Northern Adriatic)
Keywords: Salicornia emerici; Salicornia veneta; Salicornia patula; Gulf of Trieste; cpDNA; nrDNA; Flow cytometry; Morphologic variability
A species-level phylogenetic study of the Verbena complex (Verbenaceae) indicates two independent intergeneric chloroplast transfers
Keywords: Species-level phylogenetics; Chloroplast transfer; cpDNA; Waxy; Verbena; Glandularia; Junellia
Genetic diversity and differentiation of Quercus semiserrata Roxb. in northern Thailand revealed by nuclear and chloroplast microsatellite markers
Keywords: cpDNA; Genetic diversity; Microsatellites; Rare species; Tropical tree
Reticulate or tree-like chloroplast DNA evolution in Sileneae (Caryophyllaceae)?
Keywords: Sileneae; cpDNA; Chloroplast recombination; Incongruence; Indel characters
Nuclear and cpDNA sequences combined provide strong inference of higher phylogenetic relationships in the phlox family (Polemoniaceae)
Keywords: Congruence; Combined analysis; cpDNA; ITS; Long branches; Monophyly
Systematics of Gagea and Lloydia (Liliaceae) and infrageneric classification of Gagea based on molecular and morphological data
Keywords: Gagea; Lloydia; ITS region; Liliaceae; cpDNA; Phylogeny; psbA–trnH intergenic spacer; Systematic; trnL–trnF intergenic spacer
Chloroplast DNA diversity in Castanopsis hystrix populations in south China
Keywords: cpDNA; SSR; Genetic differentiation; Castanopsis hystrix
Phylogeographic study reveals the origin and evolutionary history of a Rhododendron species complex in Taiwan
Keywords: cpDNA; Evolutionary origin; Phylogeography; Rhododendron; Species complex; Taiwan
Circumpolar phylogeography of Juncus biglumis (Juncaceae) inferred from AFLP fingerprints, cpDNA sequences, nuclear DNA content and chromosome numbers
Keywords: AFLP; Arctic-alpine; cpDNA; Flow cytometry; Immigration; Juncus; Ploidy levels