Keywords: HGT، انتقال ژن افقی; RM, restriction modification; NICU, neonatal intensive care units; HGT, horizontal gene transfer; CFU, colony forming unitElectroporation; Transformation efficiency; Restriction–modification barrier; Staphylococcus capitis; Biofilm; Cell competency
مقالات ISI HGT، انتقال ژن افقی (ترجمه نشده)
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Keywords: HGT، انتقال ژن افقی; Bacterial Communication; Bowel Disease; Host-Microbe Interactions; Inflammatory; MicrobiomeAMP, antimicrobial peptides; CD, Crohn’s disease; CDI, contact-dependent growth inhibition; GI, gastrointestinal; HGT, horizontal gene transfer; IBD, inflammatory b
Keywords: HGT، انتقال ژن افقی; HGT, horizontal gene transfer; SIgA, secretory immunoglobulin A; AMP, antimicrobial peptide; ROS, reactive oxygen species; RNS, reactive nitrogen species; IBD, inflammatory bowel disease; PUL, polysaccharide utilization locusbacterial resilience; antibiot
A newly discovered ubiquitin-conjugating enzyme E2 correlated with the cryogenic autolysis of Volvariella volvacea
Keywords: HGT، انتقال ژن افقی; UBE2, Ubiquitin-conjugating enzyme E2; UBEV2, One type of UBE2 in Volvariella volvacea; HGT, Horizontal gene transfer; FBDC, Cyclin-like F-box domain; HDF, Herb decay fungi; WDF, Wood decay fungi; GAPDH, Glyceraldehyde-3-phosphate dehydrogenase; ML, Maxim
A functional difference between native and horizontally acquired genes in bdelloid rotifers
Keywords: HGT، انتقال ژن افقی; SL, spliced leader; HGT, horizontal gene transfer; PCR, polymerase chain reaction; RACE, rapid amplification of cDNA ends; GSP, gene-specific primerSpliced leader; trans-Splicing; Horizontal (lateral) gene transfer; Foreign genes; Native genes; Domesticat
Comparative genomic study of three species within the genus Ornithinibacillus, reflecting the adaption to different habitats
Keywords: HGT، انتقال ژن افقی; HGT, horizontal gene transfer; COG, Clusters of Orthologous Groups of proteins; ARG-ANNOT, Antibiotic Resistance Gene-ANNOTation; VFDB, Virulence Factor Database; MLS, macrolide–lincosamide–streptogramin; Gly, glycopeptides; Bla, beta-lactams; Phe, phenic
In silico analysis of 5′-UTRs highlights the prevalence of Shine–Dalgarno and leaderless-dependent mechanisms of translation initiation in bacteria and archaea, respectively
Keywords: HGT، انتقال ژن افقی; bp, base pair; CDS, coding sequence; DNA, Deoxyribonucleic Acid; HGT, horizontal gene transfer; IF, initiation factor; mRNA, messenger Ribonucleic Acid; nt, nucleotide; ORF, open reading frame; RNA, Ribonucleic Acid; SD, Shine Dalgarno; TIS, translation i
Complete genome sequencing and comparative analyses of broad-spectrum antimicrobial-producing Micromonospora sp. HK10
Keywords: HGT، انتقال ژن افقی; COG, clusters of orthologous groups; KEGG, Kyoto encyclopedia of genes and genomes; HGT, horizontal gene transfer; GI, genetic island; IS, insertion sequence; CRISPRs, clustered regularly interspaced short palindromic repeats; SRP, signal recognition part
Identification of Pif1 helicases with novel accessory domains in various amoebae
Keywords: HGT، انتقال ژن افقی; G4, G-quadruplex; HGT, horizontal gene transfer; CUE, coupling of ubiquitin conjugation to endoplasmic reticulum degradation; UBA, ubiquitin-associated; Smr, small MutS-related; ORC, origin recognition complex; UDGase, uracil DNA glycosylasePif1 helicase;
Functional analysis of the type II toxin–antitoxin systems of the MazEF and RelBE families in Bifidobacterium longum subsp. infantis ATCC 15697
Keywords: HGT، انتقال ژن افقی; Bifidobacterium; Human intestinal microbiota; Toxin–antitoxin systems; RibonucleaseTA, toxin–antitoxin; TAS, toxin–antitoxin system; HGT, horizontal gene transfer; BB, Bifidobacterium broth medium; MIC, minimal inhibitory concentration
A comparative study of class 1 integrons in Acinetobacter baumannii
Keywords: HGT، انتقال ژن افقی; DNA, deoxyribonucleic acid; MDR, multidrug resistance; IntI, integrase; HGT, horizontal gene transfer; IS, insertion sequence; AbaRs, antibiotic resistance islandsAcinetobacter baumannii; Integron; Integrase
Bacterial origin of a diverse family of UDP-glycosyltransferase genes in the Tetranychus urticae genome
Keywords: HGT، انتقال ژن افقی; Tetranychus urticae; UDP-glycosyltransferase; Detoxification; Horizontal gene transfer; Arthropoda; ChelicerataaaID, amino acid identity; CDS, coding sequences; GT, glycosyltransferase; HGT, horizontal gene transfer; TM, transmembrane domain; TSA, transcr
Role of plasmid- and chromosomally encoded Hha proteins in modulation of gene expression in E. coli O157:H7
Keywords: HGT، انتقال ژن افقی; NAPs, nucleioid-associated proteins; HGT, horizontal gene transfer; LB, Luria–BertaniE. coli O157:H7; Hha; H-NS; Plasmid; pO157; Nucleoid-associated proteins
On the Origin of the Selectivity of Plasmidic H-NS towards Horizontally Acquired DNA: Linking H-NS Oligomerization and Cooperative DNA Binding
Keywords: HGT، انتقال ژن افقی; DBD, DNA-binding domain; dsDNA, double-stranded DNA; EDTA, ethylenediaminetetraacetic acid; EMSA, electrophoretic mobility shift assay; HGT, horizontal gene transfer; HSQC, heteronuclear single quantum coherenceallosteric interactions; indirect DNA readou
Initial risk assessment of genetically modified (GM) microalgae for commodity-scale biofuel cultivation
Keywords: HGT، انتقال ژن افقی; EDAB, ecosystem disruptive algal bloom; GM, genetically modified, modifying, or modification; HAB, harmful algal bloom; HGT, horizontal gene transfer; NUE, nutrient use efficiency; RES, reduced ecosystem services; RGP, reduced grazing pressureAlgae; Biofu
Cell-to-cell miRNA transfer: From body homeostasis to therapy
Keywords: HGT، انتقال ژن افقی; miRNA, microRNA; HGT, horizontal gene transfer; HDL, high-density lipoprotein; MVB, multivesicular body; nSMase2, sphingomyelinase-2; DC, dendritic cellsmiRNAs; Therapy; Hormones; HGT; Nanovesicles; Body fluids
Structure-based phylogeny of polyene macrolide antibiotic glycosyltransferases
Keywords: HGT، انتقال ژن افقی; AGTs, antibiotic glycosyltransferases; AIC, akaike information criterion; BIC, Bayesian information criterion; CYP450, cytochrome P450; FGTs, flavonoid glycosyltransferases; GT, glycosyltransferase; HGT, horizontal gene transfer; MCMCMC, Metropolis-couple
Phycoerythrin evolution and diversification of spectral phenotype in marine Synechococcus and related picocyanobacteria
Keywords: HGT، انتقال ژن افقی; AU, approximately unbiased; CA, chromatic adaptation; HGT, horizontal gene transfer; ML, maximum likelihood; MP, maximum parsimony; PBS, phycobilisome; PE, phycoerythrin; PEB, phycoerythrobilin; PUB, phycourobilinAdaptive evolution; Approximately unbiased
Analysis of the genome and proteome composition of Bdellovibrio bacteriovorus: Indication for recent prey-derived horizontal gene transfer
Keywords: HGT، انتقال ژن افقی; CAI, Codon adaptation index; COA, Correspondence analysis; RSCU, Relative synonymous codon usage; RAAU, Relative amino acid usage; HEG, Highly expressed genes; LEG, Lowly expressed genes; GRAVY, Average hydropathy; HGT, Horizontal gene transfer; CSAP, Cel
Comparative genomic and phylogenetic investigation of the xenobiotic metabolizing arylamine N-acetyltransferase enzyme family
Keywords: HGT، انتقال ژن افقی; EMBL, European Molecular Biology Laboratory; EST, expressed sequence tag; HGT, horizontal gene transfer; MP, maximum parsimony; NAT, arylamine N-acetyltransferase; NCBI, National Center for Biotechnology Information; NJ, neighbor-joining; ORF, open readin
A novel thermostable cellulase from Fervidobacterium nodosum
Keywords: HGT، انتقال ژن افقی; CAZy, carbohydrate-active enzymes; CBM, carbohydrate-binding module; CMC, carboxymethyl cellulose; GH5, glycoside hydrolase family 5; HGT, horizontal gene transfer; pNPC, p-nitrophenyl β-d-cellobioside; RAC, regenerated amorphous celluloseCellulase; Fervi
Probing the two-domain structure of homodimeric prokaryotic and eukaryotic catalase–peroxidases
Keywords: HGT، انتقال ژن افقی; KatG, catalase–peroxidase; MagKatG1, cytosolic KatG from Magnaporthe grisea; SynKatG, KatG from Synechocystis PCC6803; CcP, cytochrome c peroxidase; APx, ascorbate peroxidase; HRP, horseradish peroxidase; HGT, horizontal gene transfer; ECD, electronic cir
Gene transfer events and their occurrence in selected environments
Keywords: HGT، انتقال ژن افقی; DNA, deoxyribonucleic acid; DNases, deoxyribonucleases; FDA, Food and Drug Administration; GI, gastrointestinal tract; GM, genetically modified; HC, haemorrhagic colitis; HGT, horizontal gene transfer; HUS, haemolytic–uremic syndrome; ROAR, reservoirs of
Horizontal gene transfer of virulence determinants in selected bacterial foodborne pathogens
Keywords: HGT، انتقال ژن افقی; °C, degrees Celsius; DNA, deoxyribonucleic acid; EHEC, enterohemorrhagic E. coli; HGT, horizontal gene transfer; Inc, incompatibility; MDR, multidrug resistant region; MRSA, methicillin resistant Staphylococcus aureus; SaPI, Staphylococcus aureus pathogen
The RJL family of small GTPases is an ancient eukaryotic invention probably functionally associated with the flagellar apparatus
Keywords: HGT، انتقال ژن افقی; HGT, horizontal gene transfer; IFT, intraflagellar transport; LECA, last eukaryotic common ancestor; ML, maximum likelihood; WGS, whole-genome shotgunCilium; DnaJ; Evolution; Horizontal gene transfer; Ras superfamily
Inter- and intra-genomic heterogeneity of the intervening sequence in the 23S ribosomal RNA gene of Campylobacter jejuni and Campylobacter coli
Keywords: HGT، انتقال ژن افقی; IVS, intervening sequence; PCR, polymerase chain reaction; HGT, horizontal gene transfer; NARMS, national antimicrobial resistance monitoring system; PFGE, pulsed-field gel electrophoresis23S rRNA gene; Diversity; Concerted evolution; Campylobacter; Horiz
n-Gram characterization of genomic islands in bacterial genomes
Keywords: HGT، انتقال ژن افقی; HGT, horizontal gene transfer; GI, genomic island; OI, O-island; PAI, pathogenesis island; CU, codon usagen-Grams; Statistical analysis; Zipf-like analysis; Genomic islands; Horizontal gene transfer; Backbone sequence; Escherichia coli O157:H7 EDL933
Comparative genomics of human-like Schistosoma japonicum genes indicates a putative mechanism for host–parasite relationship
Keywords: HGT، انتقال ژن افقی; EST, expressed sequence tags; HGT, horizontal gene transfer; PMB, probability matrix from blocks; RSCU, relative synonymous codon usage; CDS, coding sequence; ORF, open reading frame; NR protein database, Non-Redundant database; NJ algorithm, neighbor-joi
The importance of being essential: EMBRYO-DEFECTIVE genes in Arabidopsis
Keywords: HGT، انتقال ژن افقی; COG, Cluster of orthologous group; EMB, embryo-defective; HGT, horizontal gene transfer; KOG, eukaryotic orthologous group; LSE, lineage specific expansion; T-DNA, transfer DNA from the TI plasmid of Agrobacterium tumefaciensSeed; Embryo-defective; Essent
The Orf18 Gene Product from Conjugative Transposon Tn916 Is an ArdA Antirestriction Protein that Inhibits Type I DNA Restriction–Modification Systems
Keywords: HGT، انتقال ژن افقی; Ard, alleviation of restriction of DNA; R/M, restriction and modification; HGT, horizontal gene transfer; REase, restriction endonuclease; MTase, methyltransferase; ocr, overcome classical restriction; hsd, host specificity of DNA; SAM, S-adenosyl methion
Plant hemoglobins: What we know six decades after their discovery
Keywords: HGT، انتقال ژن افقی; Hb, hemoglobin; HGT, horizontal gene transfer; Lb, leghemoglobin; Mb, myoglobin; nsHb, non-symbiotic hemoglobin; NO, nitric oxide; tHb, truncated (2/2) hemoglobin.History; Leghemoglobin; Non-symbiotic; Truncated
Insight in to the phylogeny of polyhydroxyalkanoate biosynthesis: Horizontal gene transfer
Keywords: HGT، انتقال ژن افقی; HGT, Horizontal gene transfer; PHA, polyhydroxyalkanoates; PHB, polyhydroxybutyrate; RSCU, Relative Synonymous Codon Usage; BV, Bootstrap value; CAI, Codon Adaptation Index.Polyhydroxybutyrate; Phylogenetic analysis; Lateral gene transfer; P(3HB) polymera
Polyphasic evidence delineating the root of life and roots of biological domains
Keywords: HGT، انتقال ژن افقی; HGT, horizontal gene transfer; LBACA, Last Bacterial Common Ancestor; LECA, Last Eukaryotic Common Ancestor; LSU rRNA, large subunit ribosomal RNA; LUCA, Last Universal Common Ancestor; SSU rRNA, small subunit ribosomal RNA.Last Bacterial Common Ancestor;
Origin and evolution of DNA topoisomerases
Keywords: HGT، انتقال ژن افقی; Topoisomerases; EvolutionTopo, topoisomerase; HGT, horizontal gene transfer; BV, bootstrap value; CTD, C-terminal domain; LUCA, last universal common ancestor
Characterization of a new β-1,4-endoglucanase gene from the root-knot nematode Meloidogyne incognita and evolutionary scheme for phytonematode family 5 glycosyl hydrolases
Keywords: HGT، انتقال ژن افقی; CBD, cellulose-binding domain; CBP, cellulose-binding protein; HGT, horizontal gene transfer; GHF, glycosyl hydrolase family; J2, second stage juvenileGene duplication; Intron gain and loss; Cellulase; Plant parasitism
Inferring Functional Linkages between Proteins from Evolutionary Scenarios
Keywords: HGT، انتقال ژن افقی; interaction; evolutionary scenario; phylogenetic profile; evolutionary pressure; evolutionary eventsCOG, clusters of orthologous genes; HGT, horizontal gene transfer; KO, KEGG orthology; PBIT, prediction-based interacting tendency; PBHD, prediction based