Keywords: LTR، تکرار ترمینال طولانی; DNA, deoxyribonucleic acid; HMM, hidden Markov model; LTR, long terminal repeat; PCR, polymerase chain reaction; PHD, plant homeodomain; poly(A), polyadenilation; RNA, ribonucleic acid; RT, reverse transcription; SMC, structural maintenance of chromosome;
مقالات ISI LTR، تکرار ترمینال طولانی (ترجمه نشده)
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Keywords: LTR، تکرار ترمینال طولانی; GFP, Green Fluorescent Protein; LTR, Long Terminal Repeat; PGK, Phosphoglycerate kinase promoter; EF-1, Elongation factor 1 alpha promoter; CMV, Cytomegalovirus promoter; UCOE, ubiquitous chromatin opening element promoter; VSV-g, vesicular stomatitis vir
Resolution of Specific Nucleotide Mismatches by Wild-Type and AZT-Resistant Reverse Transcriptases during HIV-1 Replication
Keywords: LTR، تکرار ترمینال طولانی; RT, reverse transcriptase; WT, wild-type; AZTR, AZT-resistant; RIO, retroviral inside-out; LTR, long terminal repeat; ppt, polypurine tract; RSV, Rous sarcoma virus; PBS, primer binding site; RRE, Rev response elementretroviral error mechanisms; forced co
Genetic diversity in the feline leukemia virus gag gene
Keywords: LTR، تکرار ترمینال طولانی; Feline leukemia virus (FeLV); Endogenous retrovirus; Recombination; Gag; Genetic diversityFeLV, feline leukemia virus; enFeLV, endogenous FeLV sequence; gag, group-specific antigen; pol, polymerase; env, envelope; LTR, long terminal repeat; ERV-DC, endoge
The genomic architecture of the PROS1 gene underlying large tandem duplication mutation that causes thrombophilia from hereditary protein S deficiency
Keywords: LTR، تکرار ترمینال طولانی; IVS, intervening sequence; VTE, venous thromboembolic disorders; PS, protein S; CN, copy number; MLPA, multiplex ligation-dependent probe amplification; QGRS, quadruplex-forming G-rich sequences; LTR, long terminal repeat; ERV1, endogenous retroviral sequ
Characterization and chromosomal organization of Ty1-copia retrotransposons in wax gourd
Keywords: LTR، تکرار ترمینال طولانی; dN, non-synonymous substitution; dS, synonymous substitution; FISH, fluorescent in situ hybridization; LTR, long terminal repeat; PCR, polymerase chain reaction; RT, reverse transcriptase; TE, transposable elementWax gourd; Ty1-copia retrotransposons; Rev
Use of gene-modified regulatory T-cells to control autoimmune and alloimmune pathology: Is now the right time?
Keywords: LTR، تکرار ترمینال طولانی; CAR, chimeric antigen receptor; CEA, carcinoembryonic antigen; CNS, central nervous system; GITR, glucocorticoid-induced TNFR-related protein; GvHD, graft versus host disease; LTR, long terminal repeat; MAGE, melanoma-associated antigen; MOG, myelin oligo
Evolution of the ONSEN retrotransposon family activated upon heat stress in Brassicaceae
Keywords: LTR، تکرار ترمینال طولانی; LTR, long terminal repeat; ABRC, Arabidopsis biological resource center; BLAST, basic local alignment search tool; TAIR, the Arabidopsis information resource; RT, reverse transcriptase; CDS, coding DNA sequence; TE, transposable elementRetrotransposon; Br
Alu-related transcript of TJP2 gene as a marker for colorectal cancer
Keywords: LTR، تکرار ترمینال طولانی; TJP2, tight junction protein 2; RT-PCR, reverse transcription polymerase chain reaction; SINE, short interspersed nuclear element; LINE, long interspersed nuclear element; LTR, long terminal repeat; UTR, untranslated region; CDS, coding region; miRNA, mic
Widespread, abundant, and diverse TE-associated siRNAs in developing wheat grain
Keywords: LTR، تکرار ترمینال طولانی; DAP, days after pollination; DCL, DICER-like; DNA, deoxyribonucleic acid; GB, giga base; GRA8, 8-DAP grains; GRA15, 15-DAP grains; LTR, long terminal repeat; mRNA, message RNA; NCBI, National Center for Biotechnology Information; PCR, polymerase chain rea
New insights into helitron transposable elements in the mesopolyploid species Brassica rapa
Keywords: LTR، تکرار ترمینال طولانی; TE, transposable element; RC, rolling circle; RPA, replication protein A; TSDs, target site duplications; TIRs, terminal inverted repeats; SSR, simple sequence repeat; psRNATarget, plant small RNA target analysis server; LTR, long terminal repeat; LINE, l
Effect of Mimetic CDK9 Inhibitors on HIV-1-Activated Transcription
Keywords: LTR، تکرار ترمینال طولانی; LTR, long terminal repeat; TAR, trans-acting-responsive RNA element; GAPDH, glyceraldehyde 3-phosphate dehydrogenase; CTD, C-terminal domain; GST, glutathione S-transferase; Pol II, polymerase II; PDB, Protein Data Bank; PBMC, peripheral blood mononuclear
Characterization and evolution of 5′ and 3′ untranslated regions in eukaryotes
Keywords: LTR، تکرار ترمینال طولانی; UTR, untranslated region; mRNA, messenger RNA; 5′ UTR, 5′ untranslated region; 3′ UTR, 3′ untranslated region; miRNA, MicroRNA; SSR, simple sequence repeat; SINE, short interspersed element; LINE, long interspersed element; LTR, long terminal repeat; ORF,
Adeno-associated virus Rep-mediated targeting of integrase-defective retroviral vector DNA circles into human chromosome 19
Keywords: LTR، تکرار ترمینال طولانی; AAV, adeno-associated virus; AAVS1, AAV integration site; EGFP, enhanced green fluorescent protein; FBS, fetal bovine serum; IDRV, integrase-defective retroviral vector; LTR, long terminal repeat; p5IEE, p5 integration efficiency element; RBS, Rep-binding
A non-LTR retroelement extinction in Spermophilus tridecemlineatus
Keywords: LTR، تکرار ترمینال طولانی; TE, transposable element; LINE, long interspersed element; SINE, short interspersed element; MYA, million years ago; MY, million years; LTR, long terminal repeat; UTR, untranslated region; K2P, Kimura 2-parameter; Mb, megabaseTransposable element; Retrotr
Regulation of cyclin T1 expression and function by an alternative splice variant that skips exon 7 and contains a premature termination codon
Keywords: LTR، تکرار ترمینال طولانی; P-TEFb, positive transcription elongation factor b; PBMC, peripheral blood mononuclear cells; CHX, cycloheximide; WORT, wortmannin; HIV, human immunodeficiency virus; LTR, long terminal repeat; AMA, α-amanitin; PHA, phytohemagglutininCyclin T1 (CCNT1); Al
Accord insertion in the 5′ flanking region of CYP6G1 confers nicotine resistance in Drosophila melanogaster
Keywords: LTR، تکرار ترمینال طولانی; AM, D. melanogaster populations from Africa; CM, D. melanogaster populations from California; DDT, Dichloro-Diphenyl-Trichloroethane; LTR, long terminal repeat; PCR, polymerase chain reaction; RT-PCR, reverse transcriptase PCR; P450, cytochrome P450 monoo
The impact of transposable elements on eukaryotic genomes: From genome size increase to genetic adaptation to stressful environments
Keywords: LTR، تکرار ترمینال طولانی; bp, base pair; HERV, human endogenous retrovirus; LINE, long interspersed nuclear element; L1, LINE-1; LTR, long terminal repeat; MITE, miniature inverted-repeat transposable element; SINE, short interspersed nuclear element; SVA, SINE-variable number of
FoxA1 and glucocorticoid receptor crosstalk via histone H4K16 acetylation at a hormone regulated enhancer
Keywords: LTR، تکرار ترمینال طولانی; au, arbitrary units; CR, conserved region; DBD, DNA binding domain; DMS, dimethylsulphate; DNase I, deoxyribonuclease I; FoxA1, the forkhead box transcription factor FoxA1; GR, glucocorticoid receptor; LTR, long terminal repeat; MMTV, mouse mammary tumor
Gene therapy for primary adaptive immune deficiencies
Keywords: LTR، تکرار ترمینال طولانی; Gene therapy; severe combined immune deficiency; retrovirus; lentivirus; Wiskott-Aldrich syndromeADA, Adenosine deaminase; HSCT, Hematopoietic stem cell transplantation; LMO-2, LIM domain only 2; LTR, Long terminal repeat; NK, Natural killer; PID, Primary
Comparative analysis of transposable elements in the melanogaster subgroup sequenced genomes
Keywords: LTR، تکرار ترمینال طولانی; TE, Transposable Element; LTR, Long Terminal Repeat; dS, synonymous substitution rate; HT, Horizontal Transfer; rasiRNA, repeat-associated small interfering RNATransposable element; Horizontal transfer; Introgression; Comparative genomics; Drosophila; TE
NF-kappaB inhibition improves the sensitivity of human glioblastoma cells to 5-aminolevulinic acid-based photodynamic therapy
Keywords: LTR، تکرار ترمینال طولانی; 5-ALA, 5-aminolevulinic acid; BCL2, B-cell lymphoma 2; c-FLIP, cellular FLICE-inhibitory protein; EMSA, electrophoretic mobility shift assay; IAP, inhbitor of apoptosis; IκB, inhibitory κB; LDH, lactate dehydrogenase; LTR, long terminal repeat; mTOR, mamm
HIV-1 Infection Induces Acetylation of NPM1 That Facilitates Tat Localization and Enhances Viral Transactivation
Keywords: LTR، تکرار ترمینال طولانی; HIV-1, human immunodeficiency virus type 1; NPM1, nucleophosmin; LTR, long terminal repeat; HAT, histone acetyltransferase; siRNA, small interfering RNA; ChIP, chromatin immunoprecipitation; PBS, phosphate-buffered saline; EDTA, ethylenediaminetetraacetic
Characterization of a CENP-B homolog in the holocentric Lepidoptera Spodoptera frugiperda
Keywords: LTR، تکرار ترمینال طولانی; LTR, Long Terminal Repeat; ACA, anti-centromere antibodies; TBP, TATA box Binding Protein; ChIP, Chromatin Immunoprecipitation; TE, transposable elementCENP-B; Centromere; Holocentric; Transposable element; Transposon domestication
The Reverse Transcriptase Encoded by the Non-LTR Retrotransposon R2 Is as Error-Prone as That Encoded by HIV-1
Keywords: LTR، تکرار ترمینال طولانی; RT, reverse transcriptase; LTR, long terminal repeat; HIV-1, human immunodeficiency virus type 1; MuLV, murine leukemia virus; AMV, avian myeloblastosis virus; TPRT, target-primed reverse transcription; T/P, template/primerreverse transcriptases; retrotra
Identification of Critical Motifs within HIV-1 Integrase Required for Importin α3 Interaction and Viral cDNA Nuclear Import
Keywords: LTR، تکرار ترمینال طولانی; HIV-1, human immunodeficiency virus type 1; PIC, pre-integration complex; Vpr, viral protein R; MA, matrix; IN, integrase; CCD, catalytic core domain; CTD, C-terminal domain; NLS, nuclear localization signal; LTR, long terminal repeat; Co-IP, co-immunopre
HIV-1 Integrase Strand Transfer Inhibitors Stabilize an Integrase–Single Blunt-Ended DNA Complex
Keywords: LTR، تکرار ترمینال طولانی; IN, integrase; STI, strand transfer inhibitors; ISD, IN–single DNA; RAL, raltegravir; HIV, human immunodeficiency virus; PIC, preintegration complex; LTR, long terminal repeat; SC, synaptic complex; STC, strand transfer complex; PFV, prototype foamy virus
Flexible Nature and Specific Functions of the HIV-1 Nucleocapsid Protein
Keywords: LTR، تکرار ترمینال طولانی; ERV, endogenous retrovirus; gRNA, genomic RNA; HAART, highly active antiretroviral therapy; HIV-1, human immunodeficiency virus type 1; LTR, long terminal repeat; MA, matrix; NA, nucleic acid; NC, nucleocapsid; PBS, primer binding site; PDB, Protein Data
In Vitro DNA Tethering of HIV-1 Integrase by the Transcriptional Coactivator LEDGF/p75
Keywords: LTR، تکرار ترمینال طولانی; IN, integrase; NLS, nuclear localization signal; LTR, long terminal repeat; PIC, preintegration complex; IBD, integrase binding domain; HIV-1, human immunodeficiency virus type 1; 1O2, singlet oxygen; CR1, charged region 1; MBP, maltose binding protein; F
Lineage-specific transgene expression in hematopoietic cells using a Cre-regulated retroviral vector
Keywords: LTR، تکرار ترمینال طولانی; BM, bone marrow; eGFP, enhanced green fluorescent protein; GOI, gene of interest; HEL, hen–egg lysozyme; LTR, long terminal repeat; ORF, open reading frameBone marrow; Cre recombinase; Retroviral vector; Translation
Mechanism of action of the HIV-1 integrase inhibitory peptide LEDGF 361–370
Keywords: LTR، تکرار ترمینال طولانی; AIDS, acquired immunodeficiency syndrome; AA, amino acids; HIV, human immunodeficiency virus; LTR, long terminal repeat; IN, integrase; MAGI, multinuclear activation of a galactosidase indicator; LEDGF, lens epithelium derived growth factor; IBD, integras
The Idefix enhancer-blocking insulator also harbors barrier activity
Keywords: LTR، تکرار ترمینال طولانی; bp, base pair(s); Cre, phage P1 integrase; FRT, Flp-recognition target; lox, integration (crossover) site on phage P1 genome; LTR, Long Terminal Repeat; MAR, Matrix Associated Region; PCR, Polymerase Chain Reaction; scs, specialized chromatin structureChr
Genetic diversity of Ty1-copia retrotransposons in a wild species of Cucumis (C. hystrix)
Keywords: LTR، تکرار ترمینال طولانی; LTR, long terminal repeat; ORF, open reading frame; PCR, polymerase chain reaction; RT, reverse transcriptase; RT-PCR, reverse transcription PCR; TE, transposable elementCucumis hystrix; Retrotransposons; Reverse transcriptase; Heterogeneity; Transcriptio
Natural selection maintains the transcribed LTR retrotransposons in Nosema bombycis
Keywords: LTR، تکرار ترمینال طولانی; microsporidia; LTR retrotransposon; transcribed; purifying selection; positive selectionNbr, Nosema bombycis LTR retrotransposon; TEs, transposable elements; LTR, long terminal repeat; Pro, protease; RT, reverse transcriptase; RH, RNase H; INT, integrase
The phylogeny of orthoretroviral long terminal repeats (LTRs)
Keywords: LTR، تکرار ترمینال طولانی; LTR, long terminal repeat; HMM, Hidden Markov Model; MMTV, Mouse Mammary Tumor Virus; HML, human MMTV-like; HERV, human endogenous retrovirus; pol, polymerase gene nucleotide sequence; Pol, polymerase gene amino-acid sequence; Gag, group antigen amino-aci
Ancient repeat sequence derived from U6 snRNA in primate genomes
Keywords: LTR، تکرار ترمینال طولانی; Cjac, Callithrix jacchus; Gg, Gorilla gorilla; Hs, Homo sapiens; LINE, Long Interspersed Nuclear Element; LTR, Long Terminal Repeat; Mmul, Macaca mulatta; Mmur, Microcebus murinus; OCT, octamer element; Ogar, Otolemur garnettii; ORF, Open Reading Frame; P
A shotgun approach to discovering and reconstructing consensus retrotransposons ex novo from dense contigs of short sequences derived from Genbank Genome Survey Sequence database records
Keywords: LTR، تکرار ترمینال طولانی; GSS, genome survey sequence; HTGS, high throughput genome sequence; Int, integrase; LTR, long terminal repeat; NT/NR, nucleotide non-redundant; ORF, open reading frame; PBS, tRNA primer binding site; PPT, polypurine tract; Prot, aspartic acid protease; RH
Multiple chicken repeat 1 lineages in the genomes of oestroid flies
Keywords: LTR، تکرار ترمینال طولانی; CR1, chicken repeat 1; RT, reverse transcriptase; EN, endonuclease; LTR, long terminal repeat; LINE, long interspersed elements; ORF, open reading frame; TRPT, target primed reverse transcription; TE, transposable element; PMI, post mortem intervalCR1; Re
The hobo transposon and hobo-related elements are expressed as developmental genes in Drosophila
Keywords: LTR، تکرار ترمینال طولانی; Aa, amino acid; cDNA, DNA complementary to RNA; DNase, deoxyribonuclease; dNTP, deoxyribonucleoside triphosphate; iRNA, RNA interference; kb, kilobase; LTR, long terminal repeat; ORF, open reading frame; TIRs, terminal inverted repeats; UTR, untranslated
DNA methylation analysis of the mammalian PEG3 imprinted domain
Keywords: LTR، تکرار ترمینال طولانی; CpG, cytosine followed immediately by guanine; DMR, differentially methylated region; LTR, long terminal repeat; SINE, small interspersed nuclear element; LINE, long interspersed nuclear element; COBRA, COmbined Bisulfite Restriction Analysis; ES cell, em
Nrf2 is involved in inhibiting Tat-induced HIV-1 long terminal repeat transactivation
Keywords: LTR، تکرار ترمینال طولانی; HIV-1, human immunodeficiency virus type 1; AIDS, acquired immunodeficiency syndrome; HAART, highly active antiretroviral therapy; LTR, long terminal repeat; TAR, transactivation-responsive element; GSH, glutathione; ROS, reactive oxygen species; PBS, pho
The homeodomain protein Cux1 interacts with Grg4 to repress p27kip1 expression during kidney development
Keywords: LTR، تکرار ترمینال طولانی; LTR, long terminal repeat; PBS, primer binding site; TSD, target site duplication; TE, transposable element; GAG, group specific antigen; PRO, protease domain; RT, reverse transcriptase domain; INT, integrase domain; ENV, envelop protein
Identification of expressed transposable element insertions in the sequenced genome of Drosophila melanogaster
Keywords: LTR، تکرار ترمینال طولانی; EST, Expressed Sequence Tag; LTR, Long Terminal Repeat; PCR, Polymerase Chain Reaction; TE, Transposable Element; UTR, UnTranslated RegionTransposable element; EST; Expression; Drosophila melanogaster; Transposon
Identification of novel LTR retrotransposons in the genome of Aedes aegypti
Keywords: LTR، تکرار ترمینال طولانی; LTR, long terminal repeat; PBS, Primer Binding Site; TSD, target site duplication; TE, transposable element; GAG, group specific antigen; PRO, protease domain; RT, reverse transcriptase domain; INT, integrase domain; ENV, envelop proteinAedes aegypti; Bel
The evolution of two partner LINE/SINE families and a full-length chromodomain-containing Ty3/Gypsy LTR element in the first reptilian genome of Anolis carolinensis
Keywords: LTR، تکرار ترمینال طولانی; SINE, short interspersed element; LINE, long interspersed element; LTR, long terminal repeat; ORF, open reading frame; RT, reverse transcriptase; EN, endonuclease; TE, transposable element; Myr, million yearsSauria SINE; Bov-B LINE; Anolis SINE 2; Anolis
Structural analysis of 83-kb genomic DNA from Thellungiella halophila: Sequence features and microcolinearity between salt cress and Arabidopsis thaliana
Keywords: LTR، تکرار ترمینال طولانی; BAC, Bacterial artificial chromosome; dK, The distance estimated by Kimura two-parameter method; DT, Divergence time; IP, Identity percent; IN, Integrase; LTR, Long terminal repeat; MS, Microsatellites; PPT, Polypurine tract; PR, Protease; PBS, Primer-bin
Hypervariable 3′ UTR region of plant LTR-retrotransposons as a source of novel satellite repeats
Keywords: LTR، تکرار ترمینال طولانی; FISH, fluorescence in situ hybridization; LTR, long terminal repeat; ORF, open reading frame; PBS, primer binding site; RT, reverse transcriptase; UTR, untranslated regionSatellite DNA evolution; Tandem repeats; Transposable elements; Computational identi
Classification and nomenclature of endogenous retroviral sequences (ERVs): Problems and recommendations
Keywords: LTR، تکرار ترمینال طولانی; dUTPase, deoxyUridineTriPhosphatase; ERV, Endogenous Retrovirus; HERV, Human Endognous Retovirus; HML, Human MMTV like; ICTV, International Committee on the Taxonomy of Viruses; LTR, Long Terminal Repeat; MMTV, Mouse Mammary Tumor Virus; TE, Transposable
Endogenous retroviral LTRs as promoters for human genes: A critical assessment
Keywords: LTR، تکرار ترمینال طولانی; TE, transposable element; ERV, endogenous retrovirus; TSS, transcription start site; TFBS, transcription factor binding site; LTR, long terminal repeat; PCR, polymerase chain reaction; EST, expressed sequence tag; CAGE, capped end gene analysis; PET, pair
Histone acetylation characterizes chromatin presetting by NF1 and Oct1 and enhances glucocorticoid receptor binding to the MMTV promoter
Keywords: LTR، تکرار ترمینال طولانی; GR, glucocorticoid receptor; GRE, glucocorticoid response element; TA, triamcinolone acetonide; RU486, mifepristone; Oct1, Octamer transcription factor 1; NF1, Nuclear factor 1; MMTV, mouse mammary tumor virus; LTR, long terminal repeat; H3, histone H3; H