Keywords: Prion protein; POPG; Conformational conversion; Chicken prion protein; Murine prion protein;
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Keywords: Co; cobalt; Ni; nickel; Tm; membrane phase transition temperature; GP; generalized polarization; DLS; dynamic light scattering; LUVs; large unilamellar vesicles; MLVs; multilamellar vesicles; POPC; 1-palmitoyl-2-oleoyl-sn-glycero-3-phosphocholine; DMPC; 1
Keywords: C12; lauric acid; C14; myristic acid; C16; palmitic acid; CG MD; coarse-grained molecular dynamics; DPPC; 1,2-dipalmitoyl-sn-glycero-3-phosphocholine; DPPG; 1,2-dipalmitoyl-sn-glycero-3 phosphoglycerol; LUV; large unilamellar vesicle; MLV; multilayer vesi
Keywords: Amphiphilic; Amyloid; Antimicrobial peptide; Membrane; Self-assembly; Chol; cholesterol; CL; cardiolipin; DMPC; dimyristoylphosphatidylcholine; DMPG; dimyristoylphosphatidylglycerol; DOPA; dioleoylphosphatidic acid; DOPC; dioleoylphosphatidylcholine; DPPC
Keywords: Aβ; amyloid beta; AD; Alzheimer's disease; BBB; blood brain barrier; CCB; calcium channel blocker; Chol; cholesterol; Cys; cysteine; DHPC; 1,2-dihexanoyl-sn-glycero-3-phosphocholine; DLPC; 1,2-dilauroyl-sn-glycero-3-phosphocholine; DMPC; 1,2-dimyristoyls
Keywords: Aβ; amyloid-beta; AFM; atomic force microscopy; ANS; 8-anilino-1-naphthalenesulfonate; αSNWT; wild-type α-synuclein; αSN103; C-terminally truncated α-synuclein; CD; circular dichroism; CTR; C-terminal region; DHPC; 1,2-dihexanoyl-sn-glycero-3-phospho
Keywords: CPPs; cell-penetrating peptides; Fmoc; N-9-fluorenylmethoxycarbonyl; PTDs; protein translocation domains; ATCC; American Type Culture Collection; IOC; Oswaldo Cruz Institute Collection; MIC; minimal inhibitory concentration; MTT; 3-[4,5-dimethylthiazol-2-
Keywords: Disulfide-rich peptides; Model membranes; Pain; Rational drug design; Surface plasmon resonance; Sodium channel; Cryo-EM; cryo-electron microscopy; DOPG; 1,2-dioleoyl-sn-glycero-3-phosphoglycerol; DHPC; 1,2-diheptanoyl-sn-glycero-3-phosphocholine; GMT; ga
Keywords: AFM; Atomic Force Microscopy; ARDS; Acute Respiratory Distress Syndrome; ATI; Alveolar Type I (cell); ATII; Alveolar Type II (cell); CBS; Captive Bubble Surfactometer; CPAP; Continuous Positive Airway Pressure; CRP; C-reactive Protein; DPPC; Dipalmitoylph
Keywords: ATR-FTIR; attenuated-total-reflectance Fourier-transform infrared; CBS; captive bubble surfactometer; DPPC; dipalmitoyl-phosphatidylcholine; DTGS; deuterium triglyceride sulfate; MD; molecular dynamics; MLVs; multi-lamellar vesicles; PBS; phosphate buffer
Keywords: bR; bacteriorhodopsin; dbR; delipidated bacteriorhodopsin; DM; n-decyl-β-d-maltopyranoside; DOPA; 1,2-dioleoylphosphatidic acid; DOPC; 1,2-dioleoylphosphatidylcholine; DOPG; 1,2-dioleoylphosphatidylglycerol; DOPS; 1,2-dioleoylphosphatidylserine; DSPG; 1,
Keywords: MD; molecular dynamics; CG; coarse-grained; NMR; nuclear magnetic resonance; ESR; electron spin resonance; EM; electron microscopy; POPC; 1-palmitoyl-2-oleoyl-sn-glycero-3-phosphocholine; POPG; 1-palmitoyl-2-oleoyl-sn-glycero-3-phosphoglycerol; POPE; 1-pa
Keywords: AMP; antimicrobial peptide; BSA; bovine serum albumin; CD; circular dichroism; CEME; a hybrid of silk moth cecropin and bee melittin; CL; cardiolipin; DGDG; diglycosyl-1,2-diacylglycerol; DPPG; 1,2-dipamitoyl-sn-glycero-3-phospho-rac-glycerol; DSC; differ
Keywords: Cd; Inorganic cadmium; CL; Cardiolipin; DM; Dimyristoyl; DMPA; 1,2-Dimyristoyl-sn-glycero-3-phosphate; DMPC; 1,2-Dimyristoyl-sn-glycero-3-phosphocholine; DMPG; 1,2-Dimyristoyl-sn-glycero-3-phospho-(1â²-rac-glycerol); DMPS; 1,2-Dimyristoyl-sn-glycero-3-ph
Keywords: SDP; scattering density profile; SANS; small angle neutron scattering; SAXS; small angle X-ray scattering; MD; molecular dynamics; NSLD; neutron scattering length density; ED; electron density; vP; volume probability; PG; phosphatidylglycerol; DOPG; 1,2-d
Keywords: CD4; Cluster determinant 4; CCP; Cell-penetrating peptide; CCR5; Human chemokine receptor 5; CXCR4; C-X-C chemokine receptor type 4; FP; Fusion peptide; HN; Hemagglutinin neuraminidase; HETCOR; Heteronuclear correlation experiment; DMPC; 1,2-dimyristoyl-s
Keywords: Protein; Hydrogen bond; Liposome; Lipid composition; DDA; dielectric dispersion anaylysis; Éâ²; relative permittivity [-]; Éâ³; dielectric loss [-]; ÎÉi; amplitude of relaxation at the ith relaxation [-]; fci; characteristic frequency at the s
Keywords: BAL; bronchoalveolar lavage; BALF; bronchoalveolar lavage fluid; cNP; concentration of polymeric nanoparticles; DLS; dynamic light scattering; DPPC; 1,2-dipalmitoyl-sn-glycero-3-phosphocholine; γads; surface tension after film adsorption; γmin; minimum
Keywords: DOI; desoctapeptide-(B23-B30) insulin; RP-HPLC; reversed phase high performance liquid chromatography; CD; circular dichroism; ThT; thioflavin-T; TEM; transmission electron-microscopy; POPG; 2-oleoyl-1-palmitoyl-sn-glycerol-3-phospho-rac(1-glycerol) sod
Keywords: AMP; antimicrobial peptide; POPC; 1-palmytoyl-2-oleoyl l-α-phosphatidylcholine; POPG; 1-palmytoyl-2-oleoyl l-α-phosphatidylglycerol; CL; cardiolipin; SPM; sphingomyelin; NaP; sodium phosphate; PI; propidium iodine; SEM; scanning electron microscopy; TLC
Keywords: AMPs; antimicrobial peptides; ATCC; American type culture collection; CD; circular dichroism; CFU; colony forming units; CLSI; Clinical and Laboratory Standards Institute; DIPEA; N,N-diisopropylethylamine; DMEM; Dulbecco's modified eagle's medium; DMF; N,
Keywords: 2xYT; double strength YT medium; AUC; analytical ultracentrifugation; CHAPS; 3-[(3-cholamidopyropyl)dimethylammonio]-1-propanesulfonate; CHS; cholesteryl hemisuccinate Tris salt; DDM; n-dodecyl-β-d-maltoside; DLS; dynamic light scattering; E. coli; Esche
Dependence on size and shape of non-nature amino acids in the enhancement of lipopolysaccharide (LPS) neutralizing activities of antimicrobial peptides
Keywords: Antimicrobial peptide; Salt resistance; Non-natural amino acid; Lipopolysaccharide (LPS) neutralization; AMPs; antimicrobial peptides; ANOVA; analysis of variance; ARRIVE; Animal Research: Reporting of in vivo Experiments; ATCC; American Type Culture Coll
New insights into the membrane association mechanism of the glycosyltransferase WaaG from Escherichia coli
Keywords: CL; cardiolipin; DHPC-d22; tail-deuterated 1,2-dihexanoyl-sn-glycero-3-phosphocholine; DMPC; 1,2-dimyristoyl-sn-glycero-3-phosphocholine; DMPG; 1,2-dimyristoyl-sn-glycero-3-phosphoglycerol; GT; glycosyltransferase; IM; inner membrane; LPS; lipopolysacchar
Systematic optimization of cell-free synthesized human endothelin B receptor folding
Keywords: RT; room temperature; SEC; size exclusion chromatography; IMAC; immobilized metal-ion affinity chromatography; CV; column volume; CE; continuous exchange; CF; cell-free; RM; reaction mixture; FM; feeding mixture; DTT; dithiothreitol; TCEP; tris-2-carboxye
A mass spectrometry based transport assay for studying EmrE transport of unlabeled substrates
Keywords: Membrane transport; Transport assay; Multidrug transporter; Mass spectrometry; Membrane protein; PMF; proton motive force; LC-MS; liquid chromatography mass spectrometry; DM; decyl maltoside; POPC; 1-palmitoyl-2-oleoyl-sn-gylcero-3-phosphocholine; POPG; 1
Stimulation of α-synuclein amyloid formation by phosphatidylglycerol micellar tubules
Keywords: α-Syn; α-Synuclein; PD; Parkinson's disease; L/P; lipid-to-protein; POPG; 1-palmitoyl-2-oleoyl-sn-glycero-3-phospho-(1â²-rac-glycerol); POPA; 1-palmitoyl-2-oleoyl-sn-glycero-3-phosphate; POPS; 1-palmitoyl-2-oleoyl-sn-glycero-3-phospho-l-serine; POPG-d3
Alzheimer's disease-associated ubiquitin mutant Ubb+1: Properties of the carboxy-terminal domain and its influence on biomolecular interactions
Keywords: AD; Alzheimer's disease; CSP; chemical shift perturbation; DUB; deubiquitinating enzyme; hetNOE; heteronuclear nuclear Overhauser effects; HSQC; heteronuclear single quantum coherence; POPC; palmitoyl oleoyl phosphatidylcholine; POPG; palmitoyl oleoyl p
Understanding the antimicrobial activity of water soluble γ-cyclodextrin/alamethicin complex
Keywords: ALM; alamethicin; γ-CD; γ-cyclodextrin; MD; molecular dynamics; AMPs; antimicrobial peptides; Aib; 2-aminoisobutyric acid; MIC; minimum inhibitory concentration; DMPC; 1 2-Dimyridtoyl-sn-glycero-3-phosphorylcholine; DHP; dihexadecyl hydrogen phosphate;
Effects of amphipathic profile regularization on structural order and interaction with membrane models of two highly cationic branched peptides with β-sheet propensity
Keywords: POPC; 1-palmitoyl-2-oleyl-sn-glycero-3-phosphocholine; POPG; 1-palmitoyl-2-oleyl-sn-glycero-3-phosphoglycerol; Triton X-100; 4-(1,1,3,3-tetramethylbutyl)phenyl-polyethylene glycol; 5NS; 5-doxyl-stearic acid; 16NS; 16-doxyl-stearic acid; AMPs; antimicrobia
NMR structures in different membrane environments of three ocellatin peptides isolated from Leptodactylus labyrinthicus
Keywords: BHK; 21 baby hamster kidney cells; CD; circular dichroism; DD K; dermadistinctin K; DPC; dodecylphosphorylcholine; DPC-d38; dodecylphosphorylcholine-d38; DSS; sodium 2,2-dimethyl-2-silapentane-5-sulfonate; Fmoc; fluorenylmethyloxycarbonyl; Gly; glycine; 1
C-terminal truncation exacerbates the aggregation and cytotoxicity of α-Synuclein: A vicious cycle in Parkinson's disease
Keywords: α-Syn; alpha-synuclein; α-Syn FL; full-length alpha-synuclein; α-Syn121; C-terminal truncated alpha-synuclein 1-121; C19; C-terminal 19-residues peptide of alpha-synuclein; CD; circular dichroism; DLB; dementia with Lewy bodies; DLS; dynamic light scat
Supramolecular zippers elicit interbilayer adhesion of membranes producing cell death
Keywords: Fibroblasts; Mitochondria; Giant vesicles; H-aggregate; NAO; 2P-FLIM; two-photon fluorescence-lifetime imaging microscopy; AO; acridine orange; ATP; adenosine triphosphate; CL; cardiolipin; DFT; density functional theory; DMEM; Dulbecco Modified Eagle Med
Binding of a type 1 RIP and of its chimeric variant to phospholipid bilayers: evidence for a link between cytotoxicity and protein/membrane interactions
Keywords: (RIPs); Ribosome-inactivating proteins; POPC; 1-palmitoyl-2-oleoyl-sn-glycero-3-phosphocholine; POPG; 1-palmitoyl-2-oleoyl-sn-glycero-3-phosphoglycerol; DPPC; 1,2-dipalmitoyl-sn-glycero-3-phosphocholine; DPPG; 1,2-dipalmitoyl-sn-glycero-3-phosphoglycerol;
Recent progress on the application of 2H solid-state NMR to probe the interaction of antimicrobial peptides with intact bacteria
Keywords: AFM; atomic force microscopy; AMP; antimicrobial peptides; CD; circular dichroism; CFU; colony forming unit; CL; cardiolipin; d31-PA; deuterated palmitic acid; DHPC; dihexanoylphosphatidylcholine; DMPC; dimyristoylphosphatidylcholine; DMPG; dimyristoylpho
Specific stabilization of CFTR by phosphatidylserine
Keywords: CF; cystic fibrosis; CFTR; cystic fibrosis transmembrane conductance regulator; EGFP; enhanced green fluorescent protein; NBD; nucleotide binding domain; PI; phosphatidylinositol; POPC; 1-palmitoyl-2-oleoyl-phosphatidylcholine; POPE; 1-palmitoyl-2-oleoyl-
Thaulin-1: The first antimicrobial peptide isolated from the skin of a Patagonian frog Pleurodema thaul (Anura: Leptodactylidae: Leiuperinae) with activity against Escherichia coli
Keywords: AFM; Atomic Force Microscopy; AMPs; Antimicrobial Peptides; BMDM; Bone-Marrow Derived Macrophages; CC50; 50% cytotoxicity concentrations; CFU; Colony Forming Units; CD; Circular Dichroism; DMEM; Dulbecco's Modified Eagle's Medium; DMPC; 1,2-Dimyristoyl-sn
Definition of an 18-mer Synthetic Peptide Derived from the GB virus C E1 Protein as a New HIV-1 Entry Inhibitor
Keywords: Acm; acetamidomethyl; ACN; acetonitrile; Dbz; diaminobenzoyl; DHB; 2,5-dihydroxybenzoic acid; DIPEA; diisopropylethylamine; FP; fusion peptide; GBV-C; GB virus C; HAART; highly active antiretroviral therapy; HATU; 2-(1H-7-azabenzotriazole-1-yl)-1,1,3,3-te
Full-length trimeric influenza virus hemagglutinin II membrane fusion protein and shorter constructs lacking the fusion peptide or transmembrane domain: Hyperthermostability of the full-length protein and the soluble ectodomain and fusion peptide make sig
Keywords: Buffer A; 50Â mM phosphate, 0.5% SRC, 50Â mM sodium phosphate, and 300Â mM NaCl at pH 8.0; Buffer B; 10Â mM Tris-HCl, 0.17% DM, and 1Â mM DTT at pH 7.4; Buffer C; 10Â mM Tris-HCl, 0.10% SRC, and 1Â mM DTT at pH 7.4; CD; circular dichroism; DM; decylma
Interaction between the NS4B amphipathic helix, AH2, and charged lipid headgroups alters membrane morphology and AH2 oligomeric state - Implications for the Hepatitis C virus life cycle
Keywords: POPC; 1-palmitoyl-2-oleoyl-sn-gylcero-3-phosphatidylcholine; POPG; 1-palmitoyl-2-oleoyl-sn-glycero-3-[phospho-rac-(1-glycerol)]; 2H-POPC; 1-palmitoyl-(d31)-2-oleoyl-sn-glycero-3-phosphatidylcholine; 2H-POPG; 1-palmitoyl-(d31)-2-oleoyl-sn-glycero-3-[phosph
Effects of nucleotide binding to LmrA: A combined MAS-NMR and solution NMR study
Keywords: ABC; ATP binding cassette; ADP; adenosine diphosphate; ATP; adenosine triphosphate; CP; cross polarization; DDM; n-dodecyl-β-d-maltoside; EM; electron microscopy; EPR; electron paramagnetic resonance; HSQC; heteronuclear single quantum coherence; INEPT;
Interaction of a peptide derived from C-terminus of human TRPA1 channel with model membranes mimicking the inner leaflet of the plasma membrane
Keywords: ATR-FTIR; attenuated total reflection Fourier transform infrared; CD; circular dichroism; DMPA; dimyristoyl phosphatidic acid; DMPC; dimyristoyl phosphatidylcholine; DMPG; dimyristoyl phosphatidyglycerol; DMPS; dimyristoyl phosphatidylserine; DSC; differe
Electrostatically driven lipid-protein interaction: Answers from FRET
Keywords: A; acceptor; A488; Alexa488; BAR; Bin-Amphiphysin-Rvs; BODIPY-PC; 2-(4,4-difluoro-5-methyl-4-bora-3a,4a-diaza-s-indacene-3-dodecanoyl)-1-hexadecanoyl-sn-glycero-3-phosphocholine; BRAP; breast cancer-associated protein; D; donor; DPH; 1,6-diphenyl-hexa
Protein misfolding cyclic amplification (PMCA): Current status and future directions
Keywords: TSEs; transmissible spongiform encephalopathies; PrPTSE; disease associated misfolded PrP; PrPC; cellular prion protein; PrPres; proteinase K resistant misfolded PrP; PrP27-30; proteinase K resistant core of misfolded PrP; rPrP; recombinant PrP; PMCA; p
Tooth enamel protein amelogenin binds to ameloblast cell membrane-mimicking vesicles via its N-terminus
Keywords: Amelogenin; Enamel; Liposomes; Intrinsic florescence spectroscopy; Ameloblasts; AI; Amelogenisis Imperfecta; POPG; 1-palmitoyl-2-oleoyl-sn-glycero-3-phosphoglycerol; POPC; 1-palmitoyl-2-oleoylsn-glycero-3-phosphocholine; POPA; 1-palmitoyl-2-oleoyl-sn-glyc
Residue specific partitioning of KL4 into phospholipid bilayers
Keywords: PS; pulmonary surfactant; SP-B; surfactant protein B; MLV; multilamellar vesicle; ARDS; acute respiratory distress syndrome; POPC; 1-palmitoyl-2-oleoyl-sn-glycero-3-phosphatidylcholine; POPG; 1-palmitoyl-2-oleoyl-sn-glycero-3-phosphatidylglycerol; DPPC; 1
Structure-activity relationships of the antimicrobial peptide gramicidin S and its analogs: Aqueous solubility, self-association, conformation, antimicrobial activity and interaction with model lipid membranes
Keywords: GS; gramicidin S, cyclo[VOLdFPVOLdFP] (the amino acid immediately after d is the d-enantiomer); GS10; cyclo[VKLdYPVKLdYP]; GS14dK4; cyclo[VKLdKVdYPLKVKLdYP]; POPC; 1-palmitoyl-2-oleoyl-sn-glycero-3-phosphorylcholine; POPG; 1-palmitoyl-2-oleoyl-sn-glycero-
Self-assembly and interactions of short antimicrobial cationic lipopeptides with membrane lipids: ITC, FTIR and molecular dynamics studies
Keywords: C16; palmitic acid; CG MD; coarse-grained molecular dynamics; DPPC; 1,2-dipalmitoyl-sn-glycero-3-phosphocholine; DPPG; 1,2-dipalmitoyl-sn-glycero-3-phosphoglycerol; LUV; large unilamellar vesicle; MLV; multilayer vesicle; POPC; 1-palmitoyl-2-oleoyl-sn-gly
Effects of cargo molecules on membrane perturbation caused by transportan10 based cell-penetrating peptides
Keywords: CPP; cell-penetrating peptide; TP10; transportan10; NickFect; NF; PepFect; PF; FACS; fluorescence activated cell sorting; POPC; palmitoyl-2-oleoyl-phosphatidylcholine; POPG; palmitoyl-2-oleoyl-phosphatidylglycerol; LUV; large unilamellar vesicle; CD; circ
Proanthocyanidins are the major anti-diabetic components of cinnamon water extract
Keywords: CD; circular dichroism; CWE; cinnamon water extract; EGCG; (â)-epigallocatechin 3-gallate; HFIP; hexafluoroisopropanol; hIAPP; human islet amyloid polypeptide; MTT; 3-(4,5-dimethylthiazol-2-yl)-2,5-diphenyltetrazolium bromide; PA; proanthocyanidins; PBS