Keywords: تعامل پروتئین DNA; Glucocorticoid receptor; Estrogen receptor; Protein-DNA interaction; Quantitative footprinting; Analytical ultracentrifugation; Thermodynamics;
مقالات ISI تعامل پروتئین DNA (ترجمه نشده)
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Structural insights into operator recognition by BioQ in the Mycobacterium smegmatis biotin synthesis pathway
Keywords: تعامل پروتئین DNA; Biotin; TetR family; BioQ; Mycobacterium; Crystal structure; Translation regulation; Protein-DNA interaction;
Structural impact of complete CpG methylation within target DNA on specific complex formation of the inducible transcription factor Egr-1
Keywords: تعامل پروتئین DNA; 5mC; 5-methylcytosine; MBD; methyl-CpG-binding domain; RMSD; root-mean-square deviation; TAMRA; tetramethylrhodamine; Protein-DNA interaction; CpG methylation; Egr-1; Crystallography; Fluorescence;
Alternative arrangements of telomeric recognition sites regulate the binding mode of the DNA-binding domain of yeast Rap1
Keywords: تعامل پروتئین DNA; Protein-DNA interaction; Analytical ultracentrifugation; Fluorescence anisotropy; Telomeres;
In various protein complexes, disordered protomers have large per-residue surface areas and area of protein-, DNA- and RNA-binding interfaces
Keywords: تعامل پروتئین DNA; Intrinsic disorder; Protein-RNA interaction; Protein-DNA interaction; Protein-protein interaction; Binding surface; Binding interface;
What a difference a cluster makes: The multifaceted roles of IscR in gene regulation and DNA recognition
Keywords: تعامل پروتئین DNA; Iron-sulfur cluster biogenesis; Rrf2 family; Transcription regulation; Protein-DNA interaction;
The crucial role of Φ- and K-segments in the in vitro functionality of Vitis vinifera dehydrin DHN1a
Keywords: تعامل پروتئین DNA; BSA; bovine serum albumin; DHN; dehydrin; DRE; dehydration-responsive elements; EMSA; Electrophoresis Mobility Shift Assay; IDPs; intrinsically disordered proteins; IPTG; isopropyl-β-d-thiogalactopyranoside; LDH; lactate dehydrogenase; LEA; late embryoge
Sequential binding of FurA from Anabaena sp. PCC 7120 to iron boxes: Exploring regulation at the nanoscale
Keywords: تعامل پروتئین DNA; Fur; Ferric uptake regulator; AFM; atomic force microscopy; UV; ultra-violet; SDS; sodium dodecyl-sulfate; DTT; dithiothreitol; EMSA; Electrophoretic mobility shift assays; PfurA; furA promoter; Ferric uptake regulator; Atomic force microscopy; Transcript
Shape string: A new feature for prediction of DNA-binding residues
Keywords: تعامل پروتئین DNA; Protein-DNA interaction; Shape string; Shape string PSSM; Shape string pair composition; Support vector machine (SVM);
UHRF1 discriminates against binding to fully-methylated CpG-Sites by steric repulsion
Keywords: تعامل پروتئین DNA; Protein-DNA interaction; Epigenetics; DNA methylation; Molecular dynamics simulation; Free energy calculation;
Semiquantitative and quantitative analysis of protein-DNA interactions using steady-state measurements in surface plasmon resonance competition experiments
Keywords: تعامل پروتئین DNA; Protein-DNA interaction; SPR; Competition experiments; Kinetics;
Cooperative dynamics of a DNA polymerase replicating complex
Keywords: تعامل پروتئین DNA; Replica exchange with flexible tempering; DNA polymerase; Protein-DNA interaction; Thermococcus gorgonarius;
Fast microscopical dissection of action scenes played by Escherichia coli RNA polymerase
Keywords: تعامل پروتئین DNA; Atomic force microscopy; Fast-scanning atomic force microscopy; RNA polymerase; Protein-DNA interaction;
The link between restriction endonuclease fidelity and oligomeric state: A study with Bse634I
Keywords: تعامل پروتئین DNA; REase; restriction endonuclease; wt; wild-type; SC; supercoiled; OC; open-circular; FLL; full-length linear; FI; fidelity index; BSA; bovine serum albumin; DTT; dithiothreitol; Tris; tris(hydroxymethyl)aminomethane; EDTA; ethylenediaminetetraacetic acid;
Structural characterization of the H-NS protein from Xylella fastidiosa and its interaction with DNA
Keywords: تعامل پروتئین DNA; Xylella fastidiosa H-NS; Protein-DNA interaction; NMR;
Interactions of replication versus repair DNA substrates with the Pol I DNA polymerases from Escherichia coli and Thermus aquaticus
Keywords: تعامل پروتئین DNA; Taq polymerase; DNA repair; Pol I; Protein-DNA interaction; Klenow; Gapped DNA;
Structural and functional characterization of the N-terminal domain of human Rad51D
Keywords: تعامل پروتئین DNA; BLM; bloom syndrome protein; HJ; Holliday junction; HR; homologous recombination; HSQC; heteronuclear single quantum correlation spectroscopy; EMSA; electrophoretic mobility shift assay; NOESY; nuclear overhauser effect spectroscopy; Rad51D-N; N-terminal
Thermodynamic linkage of large-scale ligand aggregation with receptor binding
Keywords: تعامل پروتئین DNA; Aggregation; Thermodynamic linkage; Self association; Indefinite aggregation; Protein-DNA interaction;
From steroid receptors to cytokines: The thermodynamics of self-associating systems
Keywords: تعامل پروتئین DNA; Protein-DNA interaction; Thermodynamics; Gene regulation; Steroid receptor; Cytokine;
Modeling promoter search by E. coli RNA polymerase: One-dimensional diffusion in a sequence-dependent energy landscape
Keywords: تعامل پروتئین DNA; Sliding model; Facilitated target location; Binding energy; Protein-DNA interaction; Random walk;
A molecular dynamics analysis of the GCC-box binding domain in ethylene-responsive element binding factors
Keywords: تعامل پروتئین DNA; Molecular dynamics; Protein-DNA interaction; Flexibility; Concerted motions; Hydration;
Molecular dynamics simulations of the Trp repressor-DNA complex and the AV77 mutant
Keywords: تعامل پروتئین DNA; Trp repressor; Protein-DNA interaction; AV77 mutant; Molecular dynamics simulation; Hydrogen bond;
Tau protein binds single-stranded DNA sequence specifically - the proof obtained in vitro with non-equilibrium capillary electrophoresis of equilibrium mixtures
Keywords: تعامل پروتئین DNA; EGTA; ethylene glycol-bis(β-aminoethyl ether)-N,N,Nâ²,Nâ²-tetraacetic acid; EMSA; electrophoretic mobility shift assay; IPTG; isopropyl beta-d-thiogalactopyranoside; KCE; kinetic capillary electrophoresis; NECEEM; non-equilibrium capillary electrophore
Immobilisation of a repressor protein for binding of plasmid DNA
Keywords: تعامل پروتئین DNA; ADA; adenosine deaminase; LacI; lac repressor; LB; Luria Bertani; DTT; dithiothreitol; PMSF; phenylmethylsulfonylfluoride; SDS-PAGE; sodiumdodecylsulfate-polyacrylamide gel electrophoresis; IPTG; isopropyl-β-d-thiogalactopyranoside; Plasmid DNA; Gene the
'Close-fitting sleeves': DNA damage recognition by the UvrABC nuclease system
Keywords: تعامل پروتئین DNA; Protein-DNA interaction; Bacterial nucleotide excision repair; DNA damage recognition;