Keywords: پیش بینی ساختار ثانویه; Deep learning; Secondary structure prediction; Encoder-decoder networks; Recurrent neural networks;
مقالات ISI پیش بینی ساختار ثانویه (ترجمه نشده)
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Keywords: پیش بینی ساختار ثانویه; BCAA; branched-chain amino acids; EAA; essential amino acids; BCAT; branched-chain aminotransferase; BCKDH; branched-chain α-keto acid dehydrogenase; PDB; protein data bank; RMSD; root mean square deviation; Branched-chain amino acids (BCAA); Homology mo
Keywords: پیش بینی ساختار ثانویه; AMA; amantadine; BFM; bond fluctuation method; BST-2; bone marrow stromal cell antigen 2; CD; circular dichroism; CGMD; coarse-grained molecular dynamics; ClyA; cytolysin A; DHPC; dihexanoylphosphocholine; DPC; dodecylphosphocholine; E. coli; Escherichia
Keywords: پیش بینی ساختار ثانویه; Secondary structure prediction; Support vector machine; Meta predictor; Balanced accuracy;
Identification of WD40 repeats by secondary structure-aided profile–profile alignment
Keywords: پیش بینی ساختار ثانویه; WD40 repeat; Profile–profile alignment; Remote sequence homology; Secondary structure prediction; Bioinformatics
The allergenic protein Tha p 2 of processionary moths of the genus Thaumetopoea (Thaumetopoeinae, Notodontidae, Lepidoptera): Characterization and evolution
Keywords: پیش بینی ساختار ثانویه; Tha p 2, Tha p 2 protein; ORF, Open Reading Frame; SNPs, single nucleotide polymorphisms; BT, nonparametric bootstrap; mat-Tha p 2, final mature Tha p 2 proteinAllergenic protein Tha p 2; Processionary moths; Secondary structure prediction; Molecular evol
Molecular characterization of α-gliadin genes from common wheat cultivar Zhengmai 004 and their role in quality and celiac disease
Keywords: پیش بینی ساختار ثانویه; α-gliadin; Chromosome location; Heterologous expression; Secondary structure prediction
Synthetic peptide-targeted selection of phage display mimotopes highlights immunogenic features of α-helical vs non-helical epitopes of Taenia solium paramyosin: Implications for parasite- and host-protective roles of the protein
Keywords: پیش بینی ساختار ثانویه; Phage display; Peptide; Mimotopes; Paramyosin; Taenia solium; Secondary structure prediction;
A different conformation for linker L12 in IF molecules in the molecular and filamentous forms: An hypothesis
Keywords: پیش بینی ساختار ثانویه; Intermediate filaments; Secondary structure prediction; Modelling;
DANGLE: A Bayesian inferential method for predicting protein backbone dihedral angles and secondary structure
Keywords: پیش بینی ساختار ثانویه; Bioinformatics; Chemical shifts; Dihedral angle prediction; NMR spectroscopy; Protein structure; Secondary structure prediction;
Fine-grained parallel RNA secondary structure prediction using SCFGs on FPGA
Keywords: پیش بینی ساختار ثانویه; Bioinformatics; RNA; Secondary structure prediction; SCFG model; Parallel CYK algorithm; FPGA; Hardware accelerator
Improving the protein fold recognition accuracy of a reduced state-space hidden Markov model
Keywords: پیش بینی ساختار ثانویه; Fold recognition; Hidden Markov models; Protein classification; Secondary structure prediction; Secondary structure alphabet
How Many 3D Structures Do We Need to Train a Predictor?
Keywords: پیش بینی ساختار ثانویه; membrane protein; secondary structure prediction; alpha-helical; beta-barrel; 3D structure;
Variable predictive model based classification algorithm for effective separation of protein structural classes
Keywords: پیش بینی ساختار ثانویه; Protein classification; Secondary structure prediction; Variable predictive model; Discriminant analysis; Computational biology
Homology modeling of breast cancer resistance protein (ABCG2)
Keywords: پیش بینی ساختار ثانویه; BCRP; ABC transporter; Homology modeling; Transmembrane prediction; Secondary structure prediction; Molecular docking
PreSSAPro: A software for the prediction of secondary structure by amino acid properties
Keywords: پیش بینی ساختار ثانویه; Amino acid propensities; Structural class of proteins; Secondary structure prediction; Protein structure
CSSP2: An improved method for predicting contact-dependent secondary structure propensity
Keywords: پیش بینی ساختار ثانویه; Amyloid fibril formation; Secondary structure prediction; Machine learning; Artificial neural network; Energy decomposition
Application of expert networks for predicting proteins secondary structure
Keywords: پیش بینی ساختار ثانویه; Proteins; Secondary structure prediction; Expert neural networks; Chou and Fasman frequency parameters
RNA localization signals: Deciphering the message with bioinformatics
Keywords: پیش بینی ساختار ثانویه; RNA localization; Bioinformatics; Sequence searching; Secondary structure prediction; Tertiary structure
Modeling-based characterization of the elicitor function of amino acid 461 of Cucumber mosaic virus 1a protein in the hypersensitive response
Keywords: پیش بینی ساختار ثانویه; Secondary structure prediction; Sequence analysis; Model building; Protein engineering; Electrostatic potential analysis; Plant virology; Cucumber mosaic virus; Cucumoviruses
Studies on titin PEVK peptides and their interaction
Keywords: پیش بینی ساختار ثانویه; Titin; Muscle; Circular dichroism; Native electrophoresis; Ionic interaction; Secondary structure prediction; Intrinsically disordered proteins
Amino acid propensities for secondary structures are influenced by the protein structural class
Keywords: پیش بینی ساختار ثانویه; Amino acid propensities; Structural class of proteins; Protein structure; Secondary structure prediction; Statistical methods
DCCP and DICP: Construction and Analyses of Databases for Copper- and Iron-Chelating Proteins
Keywords: پیش بینی ساختار ثانویه; copper and iron; database; primary sequence analysis; secondary structure prediction; SCOP classification;
Improving protein secondary structure prediction by using the residue conformational classes
Keywords: پیش بینی ساختار ثانویه; Secondary structure prediction; Conformational classification; Radial basis function neural network; Structure transition; Amino acid residue
Scaling laws for folding native protein structures
Keywords: پیش بینی ساختار ثانویه; Protein folding; Protein thermodynamic stability; Protein kinetics; Secondary structure prediction; Nucleation; Collapse; Finite size phase transition; Critical exponent; Scaling property; Polymer physics;
Metal binding of metallothionein-3 versus metallothionein-2: lower affinity and higher plasticity
Keywords: پیش بینی ساختار ثانویه; MT; metallothionein; DTT; dithiothreitol; TFE; 2,2,2,-trifluoroethanol; CD; circular dichroism; ESI MS; electrospray ionization mass spectroscopy; MT-3; Alzheimer's disease; ESI-MS; Secondary structure prediction; CD spectroscopy;
Cofolga: a genetic algorithm for finding the common folding of two RNAs
Keywords: پیش بینی ساختار ثانویه; Secondary structure prediction; Free-energy minimization; Sequence alignment; Covariation; Simulated annealing;