کد مقاله | کد نشریه | سال انتشار | مقاله انگلیسی | نسخه تمام متن |
---|---|---|---|---|
10481972 | 933248 | 2013 | 13 صفحه PDF | دانلود رایگان |
عنوان انگلیسی مقاله ISI
Energy-entropy dispersion relation in DNA sequences
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کلمات کلیدی
موضوعات مرتبط
مهندسی و علوم پایه
ریاضیات
فیزیک ریاضی
پیش نمایش صفحه اول مقاله

چکیده انگلیسی
For a number of virus- and bacterium genomes we use the concept of block entropy from information theory and compare it with the corresponding configurational energy, defined via the ionization energies of the nucleotides and a hopping term for their interactions in the sense of a tight-binding model. Additionally to the four-letter alphabet of the nucleotides we discuss a reduction to a two-letter alphabet. We find a well defined relation between block entropy and block energy for a not too large block length which can be interpreted as a generalized dispersion relation for all genome sequences. The relation can be used to look for enhanced interactions between virus and bacterium genomes. Well known examples for virus-virus and virus-bacterium interactions are analyzed along this line.
ناشر
Database: Elsevier - ScienceDirect (ساینس دایرکت)
Journal: Physica A: Statistical Mechanics and its Applications - Volume 392, Issue 19, 1 October 2013, Pages 4688-4700
Journal: Physica A: Statistical Mechanics and its Applications - Volume 392, Issue 19, 1 October 2013, Pages 4688-4700
نویسندگان
H. Nowak, P. Haeussler,