Identification of subspecies specific genes differentially expressed in procyclic forms of Trypanosoma brucei subspecies

Trypanosoma brucei subspecies undergo establishment and maturation in tsetse flies mid-gut and salivary glands, respectively. Successful establishment of trypanosomes in tsetse mid-gut as well as their migration to saliva gland depends on the ability of these parasites to adapt rapidly to new environmental conditions and to negotiate the physical barriers. To identify subspecies specific genes which are differentially regulated during the establishment of T. brucei subspecies in tsetse flies mid-gut, a comparative genomic analysis between different T. brucei subspecies was performed using microarrays containing about 23 040 T. brucei shotgun fragments. The whole genome analyses of RNA expression profiles revealed about 274 significantly differentially expressed genes between T. brucei subspecies. About 7% of the differentially regulated clones did not match to any T. brucei predicted genes. Most of the differentially regulated transcripts are involved in transport across cell membrane and also in the purines metabolism. The genes selectively up regulated in T. brucei gambiense and T. brucei rhodesiense (human infective T. brucei) like snoRNA and HSP70 are expressed in response to stress. The high failure rate in the process of establishment and maturation of T. brucei gambiense during cyclical transmission in tsetse flies may result from the incapacity of this parasite to regulate its growth due to the expression of a variety of chaperones or heat shock proteins. Genes selectively up regulated in T. brucei brucei like NT8.1 nucleoside/nucleobase transporters and S-adenosylmethionine synthetase may favour the establishment of this subspecies in tsetse mid-gut. These genes appear as potential targets for investigations on the development of vaccine blocking the transmission of trypanosomes in tsetse flies.