کد مقاله کد نشریه سال انتشار مقاله انگلیسی نسخه تمام متن
4357003 1300019 2014 10 صفحه PDF دانلود رایگان
عنوان انگلیسی مقاله ISI
Interspecific variability of class II hydrophobin GEO1 in the genus Geosmithia
موضوعات مرتبط
علوم زیستی و بیوفناوری علوم کشاورزی و بیولوژیک علوم کشاورزی و بیولوژیک (عمومی)
پیش نمایش صفحه اول مقاله
Interspecific variability of class II hydrophobin GEO1 in the genus Geosmithia
چکیده انگلیسی


• The class II hydrophobin GEO1 was analysed in 26 species of the genus Geosmithia.
• Deduced proteins had 44.6 % identity and minor differences in biochemical properties.
• The geo1 phylogenetic tree differed from the tree based on ITS rDNA neutral marker.
• Ka/Ks ratios were <1, suggesting that negative selection could act on this gene.
• Data are coherent with birth-and-death evolution or horizontal transfer of geo1 gene.

The genus Geosmithia Pitt (Ascomycota: Hypocreales) comprises cosmopolite fungi living in the galleries built by phloeophagous insects. Following the characterization in Geosmithia species 5 of the class II hydrophobin GEO1 and of the corresponding gene, the presence of the geo1 gene was investigated in 26 strains derived from different host plants and geographic locations and representing the whole phylogenetic diversity of the genus. The geo1 gene was detected in all the species tested where it maintained the general organization shown in Geosmithia species 5, comprising three exons and two introns. Size variations were found in both introns and in the first exon, the latter being due to the presence of an intragenic tandem repeat sequence corresponding to a stretch of glycine residues in the deduced proteins. At the amino acid level the deduced proteins had 44.6 % identity and no major differences in the biochemical parameters (pI, GRAVY index, hydropathy plots) were found. GEO1 release in the fungal culture medium was also assessed by turbidimetric assay and SDS-PAGE, and showed high variability between species. The phylogeny based on the geo1 sequences did not correspond to that generated from a neutral marker (ITS rDNA), suggesting that sequence similarities could be influenced by other factors than phylogenetic relatedness, such as the intimacy of the symbiosis with insect vectors. The hypothesis of a strong selection pressure on the geo1 gene was sustained by the low values (<1) of non synonymous to synonymous nucleotide substitutions ratios (Ka/Ks), which suggest that purifying selection might act on this gene. These results are compatible with either a birth-and-death evolution scenario or horizontal transfer of the gene between Geosmithia species.

ناشر
Database: Elsevier - ScienceDirect (ساینس دایرکت)
Journal: Fungal Biology - Volume 118, Issue 11, November 2014, Pages 862–871
نویسندگان
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