کد مقاله کد نشریه سال انتشار مقاله انگلیسی نسخه تمام متن
4496268 1623867 2014 9 صفحه PDF دانلود رایگان
عنوان انگلیسی مقاله ISI
A QSPR-like model for multilocus genotype networks of Fasciola hepatica in Northwest Spain
موضوعات مرتبط
علوم زیستی و بیوفناوری علوم کشاورزی و بیولوژیک علوم کشاورزی و بیولوژیک (عمومی)
پیش نمایش صفحه اول مقاله
A QSPR-like model for multilocus genotype networks of Fasciola hepatica in Northwest Spain
چکیده انگلیسی


• Two complex networks of Fasciola hepatica are built based on codominant genetic markers.
• A quantitative structure–property relationship (QSPR) like model is developed.
• This type of model could be used to manage and prevent the spread of fasciolosis.

Fasciola hepatica is a parasitic trematode that infects wild and domesticated mammals, particularly cattle and sheep, and causes significant economic losses to global livestock production. In the present study, we used codominant genetic markers to define and build, for the first time, complex genotype networks for F. hepatica isolated from cattle and sheep in NW Spain. We generated three types of random networks with a number of nodes and edges as close as possible to the observed networks, and we then calculated 14 node centrality measures for both observed and random networks. Finally, using Linear Discriminant Analysis (LDA) and these measures as inputs, we constructed a quantitative structure–property relationship (QSPR)-like model able to predict the propensity of a specific genotype of F. hepatica to infect different infrapopulations, farms and/or host species. The accuracy, sensitivity and specificity of the model were >90% for both training and cross-validation series. We also assessed the applicability domain of the model. This type of QSPR model is a potentially powerful tool for epidemiological studies and could be used to manage and prevent the spread of fasciolosis.

ناشر
Database: Elsevier - ScienceDirect (ساینس دایرکت)
Journal: Journal of Theoretical Biology - Volume 343, 21 February 2014, Pages 16–24
نویسندگان
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