کد مقاله | کد نشریه | سال انتشار | مقاله انگلیسی | نسخه تمام متن |
---|---|---|---|---|
7546554 | 1489633 | 2018 | 12 صفحه PDF | دانلود رایگان |
عنوان انگلیسی مقاله ISI
A model selection approach for multiple sequence segmentation and dimensionality reduction
ترجمه فارسی عنوان
رویکرد انتخاب مدل برای تقسیم چند بعدی و کاهش ابعاد
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موضوعات مرتبط
مهندسی و علوم پایه
ریاضیات
آنالیز عددی
چکیده انگلیسی
In this paper we consider the problem of segmenting n aligned random sequences of equal length m into a finite number of independent blocks. We propose a penalized maximum likelihood criterion to infer simultaneously the number of points of independence as well as the position of each point. We show how to compute exactly the estimator by means of a dynamic programming algorithm with time complexity O(m2n). We also propose another method, called hierarchical algorithm, that provides an approximation to the estimator when the sample size increases and runs in time O{mln(m)n}. Our main theoretical results are the strong consistency of both estimators when the sample size n grows to infinity. We illustrate the convergence of these algorithms through some simulation examples and we apply the method to identify recombination hotspots in real SNPs data.
ناشر
Database: Elsevier - ScienceDirect (ساینس دایرکت)
Journal: Journal of Multivariate Analysis - Volume 167, September 2018, Pages 319-330
Journal: Journal of Multivariate Analysis - Volume 167, September 2018, Pages 319-330
نویسندگان
Bruno M. Castro, Renan B. Lemes, Jonatas Cesar, Tábita Hünemeier, Florencia Leonardi,