Cytogenetic phenogram with high resolution chromosome configurations of some Korean landrace citrus by CMA banding and rDNA loci

Metaphase chromosomes of five Korean landrace citrus were analyzed to understand the phylogenetic relationship among them and to compare these characteristics with those of other Citrus species including previously reported six Korean landrace mandarins at a cytogenetic level using CMA banding patterns and rDNA loci. The CMA banding patterns of the five Korean landrace citrus were 1 A+2B+2C+6D+7E in dongjeongkyul (C. erythrosa), 3B+1C+7D+5E+2 F in hongkyul (C. tachibana), 2 A+1B+3C+4D+8E in sadoogam (C. pseudogulgul), 1 A+3B+1C+7D+6E in dangyooza (C. grandis), 1 A+1B+1C+9D+6E in jigak (C. aurantium). All types of chromosome bands were present in all accessions except in hongkyul, in which type A chromosome was absent but two of type F chromosomes were observed. The numbers of type A, B, and C chromosomes were lower in all accessions. In contrast, the type D and E chromosomes were remarkably constant and predominantly observed in all accession. The distributions of 5S and 45S rDNA loci by FISH were heterogeneous among them. All accessions possessed one 5S rDNA locus except for hongkyul, which displayed two 5S rDNA loci. And they always co-localized with 45S rDNA locus. All 45S rDNA loci were homotopic to CMA-positive regions. Every type A and B chromosomes possessed one 45S rDNA locus in the proximal region of the chromosomes. There was no type C and E chromosome with rDNA observed. Hierarchical cluster analysis and UPGMA phenogram based on CMA banding pattern combined with 5S and 45S rDNA loci of 11 Korean landrace citrus showed the strong karyotype dissimilarity in the invested taxa.