کد مقاله کد نشریه سال انتشار مقاله انگلیسی نسخه تمام متن
8956929 1646182 2018 5 صفحه PDF دانلود رایگان
عنوان انگلیسی مقاله ISI
Optimal data-driven parameterization of coiled coils
ترجمه فارسی عنوان
پارامترهای بهینه داده شده بر اساس داده های کویل های کویل شده
کلمات کلیدی
کویل کویل شده، ساختار پروتئین،
موضوعات مرتبط
علوم زیستی و بیوفناوری بیوشیمی، ژنتیک و زیست شناسی مولکولی زیست شناسی مولکولی
چکیده انگلیسی
α-Helical coiled coils (CCs) represent an important, highly regular protein folding motif. To date, many thousands of CC structures have been determined experimentally. Their geometry is usually modelled by theoretical equations introduced by F. Crick that involve a predefined set of parameters. Here we have addressed the problem of efficient CC parameterization from scratch by performing a statistical evaluation of all available CC structures. The procedure is based on the principal component analysis and yields a minimal set of independent parameters that provide for the reconstruction of the complete CC structure at a required precision. The approach is successfully validated on a set of canonical parallel CC dimers. Its applications include all cases where an efficient sampling of the CC geometry is important, such as for solving the phase problem in crystallography.
ناشر
Database: Elsevier - ScienceDirect (ساینس دایرکت)
Journal: Journal of Structural Biology - Volume 204, Issue 1, October 2018, Pages 125-129
نویسندگان
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