کد مقاله کد نشریه سال انتشار مقاله انگلیسی نسخه تمام متن
975822 933055 2006 6 صفحه PDF دانلود رایگان
عنوان انگلیسی مقاله ISI
Nearest-neighbor spacing distribution of basis in some intron-less and intron-containing DNA sequences
موضوعات مرتبط
مهندسی و علوم پایه ریاضیات فیزیک ریاضی
پیش نمایش صفحه اول مقاله
Nearest-neighbor spacing distribution of basis in some intron-less and intron-containing DNA sequences
چکیده انگلیسی
We show that the nearest neighbor distribution of distances between basis pairs of some intron-less and intron-containing coding regions are the same when a procedure, called unfolding, is applied. Such a procedure consists in separating the secular variations from the oscillatory terms. The form of the distribution obtained is quite similar to that of a random, i.e., Poissonian, sequence. This is done for the HUMBMYH7CD, DROMYONMA, HUMBMYH7 and DROMHC sequences. The first two correspond to highly coding regions while the last two correspond to non-coding regions. We also show that the distributions before the unfolding procedure depend on the secular part but, after the unfolding procedure we obtain an striking result: all distributions are similar to each other. The result becomes independent of the content of introns or the species we have chosen. This is in contradiction with the results obtained with the detrended fluctuation analysis in which the correlations yield different results for intron-less and intron-containing regions.
ناشر
Database: Elsevier - ScienceDirect (ساینس دایرکت)
Journal: Physica A: Statistical Mechanics and its Applications - Volume 372, Issue 2, 15 December 2006, Pages 368-373
نویسندگان
, , ,