Keywords: انرژی پروتئینی بهینه شده به صورت جداگانه; CH; clamp helix; DOPE; Discrete Optimized Protein Energy; DS; Discovery Studio; GOLD; Genetic Optimized Ligand Docking; HE; holoenzyme; PPI; proteinprotein interaction; PDF; probability density function; RMSD; root mean-square-deviation; RNAP; RNA polymer
مقالات ISI انرژی پروتئینی بهینه شده به صورت جداگانه (ترجمه نشده)
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Molecular and in silico analyses validates pathogenicity of homozygous mutations in the NPR2 gene underlying variable phenotypes of Acromesomelic dysplasia, type Maroteaux
Keywords: انرژی پروتئینی بهینه شده به صورت جداگانه; AMDM; Acromesomelic dysplasia, Maroteaux type; ECD; extracellular domain; GC; guanylate cyclase; CNP; C-type natriuretic peptide; PDB; protein databank; PDF; probability density function; DOPE; discrete optimized protein energy; MD; molecular dynamics; Hs
UvrB protein of Corynebacterium pseudotuberculosis complements the phenotype of knockout Escherichia coli and recognizes DNA damage caused by UV radiation but not 8-oxoguanine in vitro
Keywords: انرژی پروتئینی بهینه شده به صورت جداگانه; BER; base excision repair; BLAST; Basic Local Alignment Search Tool; DOPE; Discrete Optimized Protein Energy; NER; nucleotide excision repair; PDB; Protein Data Bank; Rg; radio of gyration; RMSD; root mean square deviation; RNS; reactive nitrogen species;
Computational elucidation of novel antagonists and binding insights by structural and functional analyses of serine hydroxymethyltransferase and interaction with inhibitors
Keywords: انرژی پروتئینی بهینه شده به صورت جداگانه; SHMT; Serine hydroxymethyltransferase; Ld; Leishmania donovani; PLP; Pyridoxal phosphate; THF; Tetrahydrofolate; TS; Thymidylate synthase; PDB; Protein Data Bank; NCBI; National Center for Biotechnology Information; DOPE; Discrete optimized protein energy
Deciphering the role of IspD (2âCâmethylâDâerythritol 4âphosphate cytidyltransferase) enzyme as a potential therapeutic drug target against Plasmodium vivax
Keywords: انرژی پروتئینی بهینه شده به صورت جداگانه; IspD; (2âCâmethylâd-erythritol 4-phosphate cytidyltransferase); PvIspD; Plasmodium vivax IspD; PfIspD; Plasmodium falciparum IspD; AtIspD; Arabidopsis thaliana IspD; MEP; Methyl erythritol phosphate (Non-mevalonate); HTS; High Throughput Screening;
Genome-wide identification, cloning and characterization of SNARE genes in bread wheat (Triticum aestivum L.) and their response to leaf rust
Keywords: انرژی پروتئینی بهینه شده به صورت جداگانه; SNARE; soluble N-ethylmaleimide sensitive factor adaptor protein; Receptors TMD; Trans-membrane domain; PR; Pathogenesis-related; qRT-PCR; quantitative Real Time PCR; CDD; Conserved Domain Database; HMM; Hidden Markov Model; MSA; Multiple sequence alignme
In silico interaction analysis of cannabinoid receptor interacting protein 1b (CRIP1b) - CB1 cannabinoid receptor
Keywords: انرژی پروتئینی بهینه شده به صورت جداگانه; CRIP; cannabinoid receptor interacting protein; FAN; factor associated with neutral sphingomyelinase; GASP; GPCR associated sorting protein; TIP3P; transferable intermolecular potential with 3 points; THC; tetra-hydro cannabinol; DOPE; discrete optimized
In silico identification of novel antagonists and binding insights by structural and functional analyses of guanylate kinase of Leishmania donovani and interaction with inhibitors
Keywords: انرژی پروتئینی بهینه شده به صورت جداگانه; GK; guanylate kinase; VL; visceral leishmaniasis; GMPK; guanosine monophosphate kinase; 5GP; 5â²-guanylic acid; GOLD; genetic optimization for ligand docking; CHARMM; chemistry of HARvard molecular mechanics; BLAST; basic local alignment search tool; PDB
Identification and expression analysis of alternatively spliced new transcript isoform of Bax gene in mouse
Keywords: انرژی پروتئینی بهینه شده به صورت جداگانه; Bcl-2; B-cell lymphoma 2; BH; Bcl-2 homology; TM; transmembrane; MOM; mitochondrial outer membrane; ART; Apoptosis Regulating Target; qRT-PCR; quantitative real time PCR; DOPE; Discrete Optimized Protein Energy; GR; glucocorticoid receptor; Sp1; specifici
Structural analysis and insight into Zika virus NS5 mediated interferon inhibition
Keywords: انرژی پروتئینی بهینه شده به صورت جداگانه; ZIKV; Zika virus; NS5; non-structural protein 5; SIAH2; seven in absentia homolog 2; STAT2; Signal Transducer and Activator of Transcription 2; MTase; methyltransferase; IFN; interferon; IRF9; Interferon Regulatory Factor 9; ISGF3; Interferon-Stimulated G
Two Eucommia farnesyl diphosphate synthases exhibit distinct enzymatic properties leading to end product preferences
Keywords: انرژی پروتئینی بهینه شده به صورت جداگانه; Eucommia; Farnesyl diphosphate synthase; Metal ion dependency; Prenyltransferase; Substrate inhibition; CLD; chain length determination; DMAPP; dimethylallyl diphosphate; DOPE; discrete optimized protein energy; FPP; farnesyl diphosphate; FPS; farnesyl di
Immunogenic peptides: B & T Cell Epitopes of Per a 10 Allergen of Periplaneta americana
Keywords: انرژی پروتئینی بهینه شده به صورت جداگانه; HLA; human leukocyte antigen; PBMC; peripheral blood mononuclear cell; DOPE; discrete optimized protein energy; NHS; normal human sera; ADH; alcohol dehydrogenase; SDAP; structural database of allergenic protein; In silico; B cell epitopes; T cell epitope
The external gate of the human and Drosophila serotonin transporters requires a basic/acidic amino acid pair for 3,4-methylenedioxymethamphetamine (MDMA) translocation and the induction of substrate efflux
Keywords: انرژی پروتئینی بهینه شده به صورت جداگانه; LeuTAa; Aquifex aeolicus leucine transporter; DOPE; discrete optimized protein energy; dSERT; Drosophila serotonin transporter; hSERT; human serotonin transporter; 5-HT; serotonin/5-hydroxytryptamine; KRH; Krebs-Ringer-HEPES buffer; MPP; N-methyl-4-phenyl
The cataract related mutation N188T in human connexin46 (hCx46) revealed a critical role for residue N188 in the docking process of gap junction channels
Keywords: انرژی پروتئینی بهینه شده به صورت جداگانه; CI; confidence interval; CL; cytoplasmic loop; Cx; connexin; DOPE; discrete optimized protein energy; E1Â +Â E2; extracellular loop; ER; end oplasmic reticulum; HB; hydrogen bond; hCx; human connexin; LY; Lucifer yellow; MD; molecular dynamics; NS; not si
Structural perspective of ARHI mediated inhibition of STAT3 signaling: An insight into the inactive to active transition of ARHI and its interaction with STAT3 and importinβ
Keywords: انرژی پروتئینی بهینه شده به صورت جداگانه; ARHI; Aplasia Ras Homologue member I; STAT3; Signal Transducer and Activator of Transcription 3; NTD; N-terminal domain; CCD; Coiled-coil domain; DBD; DNA binding domain; LD; Linker domain; SH2; Src-homology-2 domain; TAD; transactivation domain; LOH; los
Antimicrobial activity of recombinant Pg-AMP1, a glycine-rich peptide from guava seeds
Keywords: انرژی پروتئینی بهینه شده به صورت جداگانه; AMPs; antimicrobial peptides; ATCC; American type culture collection; BL21-(DE3); bacterial expression systems; BSA; bovine serum albumin; CFU; colony-forming unit; GRPs; glycine rich proteins; GST; glutathione S-transferase; HDP; host-defense peptide;
In silico identification of novel hevein-like peptide precursors
Keywords: انرژی پروتئینی بهینه شده به صورت جداگانه; NR; NCBI's non-redundant protein database; SVM; support vector machine; CAMP; Collection of Antimicrobial Peptides; DOPE; discrete optimized protein energy; (GlcNAc)3; N,N,N-triacetylglucosamine; HEV32; hevein-32; MD; molecular dynamics simulation; RMSD;