Keywords: حداکثر پارسیمونی; Phylogenetics; Maximum parsimony; Character compatibility; Perfect phylogeny; Statistical significance; Supertree; Optimal convex recoloring cost;
مقالات ISI حداکثر پارسیمونی (ترجمه نشده)
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Keywords: حداکثر پارسیمونی; Phylogenetic reconstruction; Ancestral maximum likelihood; Maximum parsimony; Statistical consistency;
Keywords: حداکثر پارسیمونی; asl; adenylosuccinate lyase; clpc; caseinolytic protease; coI; cytochrome oxidase I; cytb; cytochrome b; ML; maximum likelihood; MP; maximum parsimony; Alveolata; Apicomplexa; Haemosporida; Malaria; Parasitology;
Keywords: حداکثر پارسیمونی; DPG; diphosphatidylglycerol; DDH; DNA-DNA hybridization; FAMEs; fatty acid methyl esters; MK; menaquinone; ML; maximum likelihood; MP; maximum parsimony; NJ; neighbor-joining; PC; phosphatidylcholine; PE; phosphatidylethanolamine; PG; phosphatidylglycerol
Keywords: حداکثر پارسیمونی; Tree; Maximum parsimony; Random data; Central limit theorem
Keywords: حداکثر پارسیمونی; SI; supplementary information; ML; maximum likelihood; MP; maximum parsimony; BS; bootstrap; PP; posterior probability; I; invariant; Magnoliidae; Canellales; Laurales; Magnoliales; Piperales; Phylogeny;
Keywords: حداکثر پارسیمونی; DuCV; duck circovirus; PCR; polymerase chain reaction; nt; nucleotide; PASC; pairwise sequence comparison; PRE; potential recombination event; dN; non-synonymous substitutions; dS; synonymous substitutions; ML; maximum-likelihood; NJ; neighbor-joining; MP
A new proposal for Min subgrouping based on a maximum-parsimony algorithm for generating phylogenetic trees
Keywords: حداکثر پارسیمونی; Min family; Subgrouping; Phylogenetic tree model; Shared innovation; Maximum parsimony;
Functional redundancy in Echinocandin B in-cluster transcription factor ecdB of Emericella rugulosa NRRL 11440
Keywords: حداکثر پارسیمونی; Arg; Arginine; bp; base pair; ECB; echinocandin B; CTAB; cetyl trimethylammonium bromide; d; day; GMM; glucose minimal medium; HPLC; high performance liquid chromatography; h; hour; ICU; intensive care unit; kb; kilo base pair; MEGA; molecular evolutionar
Inflorescence diversity in subtribe Eleusininae (Poaceae: Chloridoideae: Cynodonteae)
Keywords: حداکثر پارسیمونی; Gramineae; Phylogeny; Ancestral state reconstruction; Evolution; Maximum parsimony;
Live phylogeny with polytomies: Finding the most compact parsimonious trees
Keywords: حداکثر پارسیمونی; Phylogenetics; Maximum parsimony; Live phylogeny; Polytomies;
Characterization of complete mitochondrial genome of fives tripe wrasse (Thalassoma quinquevittatum, Lay & Bennett, 1839) and phylogenetic analysis
Keywords: حداکثر پارسیمونی; ATP6 and ATP8; ATPase subunits 6 and 8; COXI-COXIII; cytochrome c oxidase subunits I-III; Cytb; apocytochrome b; ND1-ND6 and ND4L; NADH dehydrogenase subunits 1-6 and 4L; rrnL, lrRNA; large (16S) rRNA subunit (gene); rrnS, srRNA; small (12S) rRNA
Comparative genomics of Bacillus anthracis from the wool industry highlights polymorphisms of lineage A.Br.Vollum
Keywords: حداکثر پارسیمونی; DNA; deoxyribonucleic acid; SNP; single nucleotide polymorphism; canSNP; canonical single nucleotide polymorphism; VNTR; variable-number tandem repeat; MLVA; multiple-locus variable-number tandem repeat analysis; WGS; whole-genome sequencing; NGS; next ge
Untangling a species complex of arid zone grasses (Triodia) reveals patterns congruent with co-occurring animals
Keywords: حداکثر پارسیمونی; MP; maximum parsimony; ML; maximum likelihood; BI; Bayesian inference; ITS; internal transcribed spacer; ETS; external transcribed spacer; rDNA; ribosomal DNA; MDS; multidimensional scaling; CAP; canonical analysis of principal components; WA; Western Aus
Mitochondrial genome of Cricetulus migratorius (Rodentia: Cricetidae): Insights into the characteristics of the mitochondrial genome and the phylogenetic relationships of Cricetulus species
Keywords: حداکثر پارسیمونی; Mitogenome; mitochondrial genome; mtDNA; mitochondrial DNA; Myr; million years; PCR; Polymerase chain reaction; dNTP; deoxy-ribonucleoside triphosphate; ddH2O; double distilled water; AGE; agarose gel electrophoresis; BI; Bayesian inference; ML; maximum l
The complete mitochondrial genome of Strongylus equinus (Chromadorea: Strongylidae): Comparison with other closely related species and phylogenetic analyses
Keywords: حداکثر پارسیمونی; Strongylus equinus; Mitochondrial genome; Comparative analyses; Phylogenetic analyses; S. vulgaris; Strongylus vulgaris; S. equinus; Strongylus equinus; mt; mitochondrial; mtDNA; mitochondrial DNA; PCR; polymerase chain reaction; BI; Bayesian inference;
Divergence and population traits in evolution of the genus Pisum L. as reconstructed using genes of two histone H1 subtypes showing different phylogenetic resolution
Keywords: حداکثر پارسیمونی; His5; pea histone H1 subtype 5 gene; His7; pea histone H1 subtype 7 gene; ICG; Institute of Cytology and Genetics; K(a); the number of nonsynonymous substitutions per nonsynonymous site; K(s); the number of synonymous substitutions per synonymous site; MP
Assessing host-specificity of Escherichia coli using a supervised learning logic-regression-based analysis of single nucleotide polymorphisms in intergenic regions
Keywords: حداکثر پارسیمونی; SNP; single nucleotide polymorphism; PFGE; pulsed field gel electrophoresis; rep-PCR; repetitive sequence-based polymerase chain reaction; AFLP; amplified fragment length polymorphism; MLST; multilocus sequence typing; MSST; multi-spacer sequence typing;
An HcpR paralog of Desulfovibrio gigas provides protection against nitrosative stress
Keywords: حداکثر پارسیمونی; BI; Bayesian inference; BS; bootstrap; CRP/FNR; cAMP receptor protein/fumarate and nitrate reductase regulatory protein; Frdx; ferredoxin; GSNO; S-nitrosoglutathione; Hcp; hybrid cluster protein; HGT; horizontal gene transfer; ML; maximum likelihood; MP;
Unravelling the riddle of Radix: DNA barcoding for species identification of freshwater snail intermediate hosts of zoonotic digeneans and estimating their inter-population evolutionary relationships
Keywords: حداکثر پارسیمونی; Ï; nucleotide diversity; cox1; cytochrome oxidase 1; G; gamma distribution; h; haplotype number; Hd; haplotype diversity; HKY; Hasegawa-Kishino-Yano nucleotide substitution model; I; invariable sites; ITS2; ribosomal internal transcribed spacer regio
From Arabia to Iberia: A Y chromosome perspective
Keywords: حداکثر پارسیمونی; STR; Short tandem repeat; YA; Years ago; LGM; Last Glacial Maximum; BCE; Before current era; mtDNA; Mitochondrial DNA; A.D.; After death; SNP; Single nucleotide polymorphism; MJ; Median joining; MDS; Multi-dimensional Scaling; MP; Maximum parsimony; GD; G
Genetic diversity and phylogenetic analysis of Citrus (L) from north-east India as revealed by meiosis, and molecular analysis of internal transcribed spacer region of rDNA
Keywords: حداکثر پارسیمونی; North-east India; Univalents; Quadrivalents; Bayesian inference; Maximum parsimony; Species diversity; Citrus
Hide and seek: Placing and finding an optimal tree for thousands of homoplasy-rich sequences
Keywords: حداکثر پارسیمونی; Phylogenetic tree; Maximum parsimony; Homoplasy; Tree search;
Molecular evidence of 'Siisa form', a new genotype related to Onchocerca ochengi in cattle from North Cameroon
Keywords: حداکثر پارسیمونی; BI; Bayesian inference; bp; nucleotide base pair; CI; confidence interval; L3; third stage larva; ML; maximum likelihood; MP; maximum parsimony; RPMI; Roswell Park Memorial Institute medium; rRNA; ribosomal RNA; s.l.; sensu lato; Onchocerca ochengi; Oncho
The variability of the large genomic segment of ŤahyÅa orthobunyavirus and an all-atom exploration of its anti-viral drug resistance
Keywords: حداکثر پارسیمونی; AKAV; Akabane virus; BUNV; Bunyamwera virus; CAL; California complex; CHATV; Chatanga virus; DPBA; 2,4-dioxo-4-phenylbutanoic acid; dS; synonymous nucleotide substitution rate; dN; non-synonymous nucleotide substitution rate; ED; endonuclease domain; INKV
A revised phylogeny of Antilopini (Bovidae, Artiodactyla) using combined mitochondrial and nuclear genes
Keywords: حداکثر پارسیمونی; Supermatrix; Partitioned analysis; Bayesian inference; Maximum likelihood; Maximum parsimony; Random-outgroup rooting;
The complete mitochondrial genome of Biston panterinaria (Lepidoptera: Geometridae), with phylogenetic utility of mitochondrial genome in the Lepidoptera
Keywords: حداکثر پارسیمونی; Mitogenome; mitochondrial genome; PCGs; protein coding genes; ATP6 and ATP8; ATP synthase subunits 6 and 8 genes; COX1-3; cytochrome c oxidase 1-3 genes; CYTB; cytochrome b gene; ND1-6 and ND4L; NADH dehydrogenase subunits 1-6 and 4L genes; rRNA; ribo
Near intron pairs and the metazoan tree
Keywords: حداکثر پارسیمونی; Intron evolution; Molecular phylogenetics; Maximum parsimony; Metazoan phylogeny; Ecdysozoa; Rare genomic changes
Mitochondrial DNA as effective molecular markers for the genetic variation and phylogeny of the family Osteoglossidae
Keywords: حداکثر پارسیمونی; mtDNA; mitochondrial DNA; ND2; NADH dehydrogenase subunit 2; ATPase6; ATPase subunit 6; PCR; Polymerase Chain Reaction; NJ; neighbor-joining; MP; maximum parsimony; Osteoglossidae; Phylogenetic analysis; Species identification;
Comparative studies of the complete mitochondrial genomes of four Paphia clams and reconsideration of subgenus Neotapes (Bivalvia: Veneridae)
Keywords: حداکثر پارسیمونی; atp6 and atp8; ATPase subunit 6 and 8 genes; BA; Bayesian analysis; BP; bootstrap support; cob; cytochrome b gene; cox1-3; cytochrome c oxidase subunits I-III genes; ML; maximum likelihood; MNR; major non-coding region; MP; maximum parsimony; nad1-6
Morphological variability, toxinology and genetics of the dinoflagellate Dinophysis tripos (Dinophysiaceae, Dinophysiales)
Keywords: حداکثر پارسیمونی; DSP; diarrhetic shellfish poisoning; DTX; dinophysistoxin; ESI; electrospray ionization interface; LC-FLD; liquid chromatography analysis with fluorescence detection; i.p.; intraperitoneal; ITS; internal transcribed spacer; LC-MS; liquid chromatograph
New insight into the evolution of aquaporins from flowering plants and vertebrates: Orthologous identification and functional transfer is possible
Keywords: حداکثر پارسیمونی; AQPS; aquaporins; PIPs; plasma membrane intrinsic proteins; TIPs; tonoplast intrinsic proteins; NIPs; NOD26-like intrinsic proteins; SIPs; small basic intrinsic proteins; XIPs; x intrinsic proteins; HIPs; hybrid intrinsic proteins; GIPs; GlpF-like intrins
Maximum parsimony analysis of gene expression profiles permits the reconstruction of developmental cell lineage trees
Keywords: حداکثر پارسیمونی; Gene expression; Maximum parsimony; Development and differentiation; Haematopoiesis; Cell lineage trees;
Molecular phylogenetics and taxonomic reassessment of four Indian representatives of the genus Nymphaea
Keywords: حداکثر پارسیمونی; Phylogenetic relationship; Taxonomic revision; ITS; matK; trnK intron; Bayesian inference; Maximum parsimony
Effects of methodology and analysis strategy on robustness of pestivirus phylogeny
Keywords: حداکثر پارسیمونی; Bayesian approach; Classification; Maximum likelihood; Maximum parsimony; Pestivirus; Phylogeny
Maximum parsimony on subsets of taxa
Keywords: حداکثر پارسیمونی; Maximum parsimony; Ancestral state reconstruction; Two-state symmetric model
Orientobilharzia turkestanicum is a member of Schistosoma genus based on phylogenetic analysis using ribosomal DNA sequences
Keywords: حداکثر پارسیمونی; Orientobilharzia turkestanicum; Trematoda; ITS; internal transcribed spacers; 28S rDNA; 28S ribosomal DNA; rDNA; ribosomal DNA; SDS; sodium dodecyl sulfate; PCR; polymerase chain reaction; NJ; neighbor-joining; MP; maximum parsimony; Cattle; Sheep; Cashme
Sequence length bounds for resolving a deep phylogenetic divergence
Keywords: حداکثر پارسیمونی; 05C05; 92D15; Phylogenetic tree; DNA sequences; Markov process; Maximum parsimony;
Quasi-median hulls in Hamming space are Steiner hulls
Keywords: حداکثر پارسیمونی; Steiner minimal tree; Steiner hull; Maximum parsimony; Hamming space; Quasi-median operation
Species-level diversification of African dwarf crocodiles (Genus Osteolaemus): A geographic and phylogenetic perspective
Keywords: حداکثر پارسیمونی; Allopatric speciation; Bayesian phylogeny; Cladistic haplotype analysis; Crocodilians; Cryptic species; Maximum likelihood; Maximum parsimony; Morphology; Osteolaemus; Osteoblepharon; Population aggregation analysis; 12S; COI; Cyt-b; LDH-A; RAG-1
Molecular phylogeny in Indian Citrus L. (Rutaceae) inferred through PCR-RFLP and trnL-trnF sequence data of chloroplast DNA
Keywords: حداکثر پارسیمونی; Citrus; Rutaceae; Phylogeny; PCR-RFLP; trnL-trnF sequences; Maximum parsimony
Introns outperform exons in analyses of basal avian phylogeny using clathrin heavy chain genes
Keywords: حداکثر پارسیمونی; CI; consistency index; CLTC; clathrin heavy chain; CLTCL1; clathrin heavy chain-like; EGR1; early growth response factor 1; FGB; β-fibrinogen; ML; maximum likelihood; MP; maximum parsimony; Simulation; Power analysis; Congruence; Polytomy; Saturation;
Identification and analysis of a prepro-chicken gonadotropin releasing hormone II (preprocGnRH-II) precursor in the Asian seabass, Lates calcarifer, based on an EST-based assessment of its brain transcriptome
Keywords: حداکثر پارسیمونی; BLAST; basic local alignment search tool; BY; Bayesian method(s); cDNA; DNA complementary to RNA; cGnRH-II; chicken GnRH isoform II; EST; expressed sequence tag; GAP; GnRH associated peptide; GnRH; gonadotropin releasing hormone; MP; maximum parsimony; MS
The mushroom family Psathyrellaceae: Evidence for large-scale polyphyly of the genus Psathyrella
Keywords: حداکثر پارسیمونی; Systematics; Taxonomy; Fungi; Deliquescence; Morphology; GARLI; INAASE; Bayesian; Maximum likelihood; Maximum parsimony
Global mitochondrial DNA phylogeography and biogeographic history of the antitropically and longitudinally disjunct marine bryozoan Membranipora membranacea L. (Cheilostomata): Another cryptic marine sibling species complex?
Keywords: حداکثر پارسیمونی; Marine phylogeography; Bryozoa; COI; Mitochondrial DNA; Maximum likelihood; Maximum parsimony; Bayesian; Dispersal; Antitropical; Membranipora; Sibling species
Molecular taxonomy and phylogenetic relationships among Australian Nasutitermes and Tumulitermes genera (Isoptera, Nasutitermitinae) inferred from mitochondrial COII and 16S sequences
Keywords: حداکثر پارسیمونی; COII; 16S; Isoptera; Maximum Likelihood; Maximum Parsimony; Nasutitermes; Tumulitermes
Upper cortex anatomy corroborates phylogenetic hypothesis in species of Physconia (Ascomycota, Lecanoromycetes)
Keywords: حداکثر پارسیمونی; Ascomycota; Bayesian inference; Maximum parsimony; Physconia; Physconia distorta; Physconia thorstenii; Upper cortex anatomy
Application of the secondary structure model of rRNA for phylogeny: D2–D3 expansion segments of the LSU gene of plant-parasitic nematodes from the family Hoplolaimidae Filipjev, 1934
Keywords: حداکثر پارسیمونی; Character coding; Bayesian inference; D2–D3 expansion segments; Structural database; Helicotylenchus; Maximum parsimony; Rotylenchus; rRNA; Secondary structure model; Variability map
The evolutionary process of bioluminescence and aposematism in cantharoid beetles (Coleoptera: Elateroidea) inferred by the analysis of 18S ribosomal DNA
Keywords: حداکثر پارسیمونی; LBA; long-branch attraction; ML; maximum likelihood; MP; maximum parsimony; rDNA; ribosomal DNA; TBR; tree bisection-reconnection.; Cantharidae; Cantharoidea; Lampyridae; Lycidae; Phengodidae; Phylogeny;
A tabu search algorithm for maximum parsimony phylogeny inference
Keywords: حداکثر پارسیمونی; Tabu search; OR in biology; Bioinformatics; Phylogeny inference; Maximum parsimony