Keywords: سایت های مرتبط با عامل رونویسی; Common or rare variants; Resequencing analysis; Bioinformatics prediction; Transcription factor binding sites; Major depressive disorder; Suicide attempts;
مقالات ISI سایت های مرتبط با عامل رونویسی (ترجمه نشده)
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Keywords: سایت های مرتبط با عامل رونویسی; Gastric carcinoma; Expression profiles; Co-expression module; Transcription factor binding sites; MicroRNA; Bioinformatics analysis
Keywords: سایت های مرتبط با عامل رونویسی; TFBM; transcription factor binding motif(s); gfp; green fluorescent protein; Del; deletion; ED; evolutionary distance; Pita; Allele mining; Promoter mining; Core promoter; Transcription factor binding sites;
Keywords: سایت های مرتبط با عامل رونویسی; TLR; Toll-like receptor; SNP; Single nucleotide polymorphism; LRR; Leucine rich repeats; TIR; Toll-interleukin1 receptor; Kb; Kilobase; PCR; Polymerase chain reaction; ARMS; Amplification Refractory Mutation System; Goat, Toll-like receptor 5; Leucine-ric
Keywords: سایت های مرتبط با عامل رونویسی; TF; transcription factor; TFBS; transcription factor binding sites; GEP; gene expression profiling; NAFLD; nonalcoholic fatty liver disease; NASH; nonalcoholic steatohepatitis; LXR; liver X receptor; PPAR; peroxisome proliferator-activated receptor; HNF;
Association of PARK2 promoter polymorphisms and methylation with colorectal cancer in North Indian population
Keywords: سایت های مرتبط با عامل رونویسی; SNP; single nucleotide polymorphism; CRC; colorectal cancer; PARK2; Parkin gene; TSG; tumor suppressor gene; SPSS; Statistical Package of Social Sciences; PCR; polymerase chain reaction; RFLP; restriction fragment length polymorphism; MS; methylation spec
Molecular characterization of the TaWTG1 in bread wheat (Triticum aestivum L.)
Keywords: سایت های مرتبط با عامل رونویسی; QTL; Quantitative trait loci; TFBS; transcription factor binding sites; CDS; coding sequences; ESTs; Expression sequence tags; RPKM; Reads per kilobase per million reads; tpm; transcripts per million; Expression pattern; Structure; Transcription factor; S
Comparative and evolutionary studies of ALDH18A1 genes and proteins
Keywords: سایت های مرتبط با عامل رونویسی; Aldehyde dehydrogenases; Bifunctional enzyme; ALDH18A1; Glutamyl kinase; GK; Glutamyl phosphate reductase; GPR; Vertebrates; Invertebrates; Evolution; Phylogeny; Primordial gene; Gene integration; Transcription factor binding sites; CpG islands; ALDH; ald
Review articleFrom experiment-driven database analyses to database-driven experiments in Arabidopsis thaliana transcription factor research
Keywords: سایت های مرتبط با عامل رونویسی; Arabidopsis thaliana; Combinatorial elements; Databases; Transcription factors; Transcription factor binding sites;
A high-order representation and classification method for transcription factor binding sites recognition in Escherichia coli
Keywords: سایت های مرتبط با عامل رونویسی; Tensor; Partial least squares; Transcription factor binding sites; Machine learning; Classification; Computational biology;
ReviewCandidate gene analysis of the fibrinogen phenotype reveals the importance of polygenic co-regulation
Keywords: سایت های مرتبط با عامل رونویسی; Fibrinolysis; Gamma prime fibrinogen; Transcription factor binding sites; Lipids; Turbidimetry;
Drought-responsive genes expressed predominantly in root tissues are enriched with homotypic cis-regulatory clusters in promoters of major cereal crops
Keywords: سایت های مرتبط با عامل رونویسی; DREs; dehydrin response elements; TSS; translational start site; TFBS; transcription factor binding sites; HCTs; homotypic cis-clusters; CRMs; cis-regulatory modules; DREs; drought response elements; AuxREs; auxin response elements; MYCREs; MYC response e
Insights into inner ear-specific gene regulation: Epigenetics and non-coding RNAs in inner ear development and regeneration
Keywords: سایت های مرتبط با عامل رونویسی; bps; base pairs; DHS; DNase Hypersensitive sites; TFBS; transcription factor binding sites; PTMs; post-translational modifications; HDACs; histone deacetylases; H3K4me3; histone 3 lysine 4 tri-methylation; H3K27me3; histone 3 lysine 27 tri-methylation; Ch
LTR-retrotransposons in plants: Engines of evolution
Keywords: سایت های مرتبط با عامل رونویسی; AoPR1; Asparagus officinalis pathogenesis-related 1; Aox; alternate oxidase; Cf2/9; Cladosporium fulvum resistance gene; ERF1; ethylene response factor 1; ERPB/AP2; ethylene-responsive element binding protein/Apetala2; ETI; Effector-Triggered Immunity; HR
Stratifying melanoma and breast cancer TCGA datasets on the basis of the CNV of transcription factor binding sites common to proliferation- and apoptosis-effector genes
Keywords: سایت های مرتبط با عامل رونویسی; BAM; binary alignment/map; BRCA; breast cancer; CNV; copy number variation; SKCM; skin cutaneous melanoma; SNP; simple nucleotide polymorphism; SOM; supporting online material; TB; terabyte; TCGA; the cancer genome atlas; TFBS; transcription factor bindin
Hidden heterogeneity of transcription factor binding sites: A case study of SF-1
Keywords: سایت های مرتبط با عامل رونویسی; Transcription factor binding sites; SF-1; Recognition models; SiteGA; oPWM; Sitecon; ChIP-seq; Structural variants
Systematic discovery of cofactor motifs from ChIP-seq data by SIOMICS
Keywords: سایت های مرتبط با عامل رونویسی; Transcription factor; Cofactor; Motif; Transcription factor binding sites; ChIP-seq; SIOMICS
Defining bacterial regulons using ChIP-seq
Keywords: سایت های مرتبط با عامل رونویسی; ChIP-seq; Bacterial regulons; Transcriptional regulation; Genome-wide analysis; Bioinformatics analysis of genomic data; Systems biology; Transcription factor binding sites;
Computational interrogation of cis-regulatory elements of genes that are common targets of luteotropin and luteolysin in the primate corpus luteum
Keywords: سایت های مرتبط با عامل رونویسی; CL; corpus luteum; TFBS; transcription factor binding sites; PG; prostaglandin; LH; luteinizing hormone; P4; progesterone; hCG; human chorionic gonadotropin; GEO; Gene Expression Omnibus; SCARB1; scavenger receptor class B type I; SCD; stearoyl-CoA desatu
Distinct tissue expression profiles of chicken Lpin1-α/β isoforms and the effect of the variation on muscle fiber traits
Keywords: سایت های مرتبط با عامل رونویسی; fld; fatty liver dystrophic; PAP; phosphatidic acid phosphohydrolase; qPCR; real-time quantitative RT-PCR; FLR; flanking region; TFBS; transcription factor binding sites; MNLP; multiple-nucleotide length polymorphism; BFS; breast muscle fiber density; BFA
Identification of Candidate Transcription Factor Binding Sites in the Cattle Genome
Keywords: سایت های مرتبط با عامل رونویسی; Cattle; Transcription factor binding sites; In silico prediction
Predicting distinct organization of transcription factor binding sites on the promoter regions: a new genome-based approach to expand human embryonic stem cell regulatory network
Keywords: سایت های مرتبط با عامل رونویسی; ChIP, chromatin immunoprecipitation; GO, gene ontology; hESCs, human embryonic stem cells; TFBSs, transcription factor binding sitesEmbryonic stem cell; Promoter; Transcription factor binding sites; Gene ontology; Gene expression
TrFAST: A Tool to Predict Signaling Pathway-specific Transcription Factor Binding Sites
Keywords: سایت های مرتبط با عامل رونویسی; TrFAST; Transcription factor binding sites; in silico analysis; Signaling pathway; Pattern searching
Distinct mutant hepatitis B virus genomes, with alterations in all four open reading frames, in a single South African hepatocellular carcinoma patient
Keywords: سایت های مرتبط با عامل رونویسی; Subgenotype A1; PreS deletions; Truncated X; Transcription factor binding sites;
Characterization of Foxp3 gene from grass carp (Ctenopharyngodon idellus): A rapamycin-inducible transcription factor in teleost immune system
Keywords: سایت های مرتبط با عامل رونویسی; Grass carp Foxp3; Transcription factor binding sites; mRNA expression; Protein levels; Rapamycin
Towards the elucidation of the regulatory network guiding the insulin producing cells' differentiation
Keywords: سایت های مرتبط با عامل رونویسی; NGN3 (NEUROG3); neurogenin3; ESCs; Embryonic Stem Cells; TFBS; Transcription Factor Binding Sites; TFs; Transcription Factors; AP4 (TFAP4); Activating enhancer-binding Protein 4 (Transcription Factor AP-4); WISP1; WNT-Induced Secreted Protein 1; CTGF; Con
Analysis of the cathelicidin 1 gene locus in Atlantic cod (Gadus morhua)
Keywords: سایت های مرتبط با عامل رونویسی; Cathelicidin; BAC clone; Promoter; Transcription factor binding sites;
Genome-wide analysis of the cis-regulatory modules of divergent gene pairs in yeast
Keywords: سایت های مرتبط با عامل رونویسی; Yeast; Divergent gene pairs; Regulatory mechanisms; Transcription factor binding sites; cis-regulatory modules
An expert system to identify transcription factor binding target genes by phylogenetic footprinting
Keywords: سایت های مرتبط با عامل رونویسی; Expert systems; Bioinformatics; Genes; Transcription factor binding sites
The evolutionary influence of binding site organisation on gene regulatory networks
Keywords: سایت های مرتبط با عامل رونویسی; Gene regulatory network; Evolution; Transcription factor binding sites; Bimodal gene expression; Concentration dependent expression;
Combining experts in order to identify binding sites in yeast and mouse genomic data
Keywords: سایت های مرتبط با عامل رونویسی; Computational biology; Support vector machine; Imbalanced data; Sampling; Transcription factor binding sites
Identification of Conserved Regulatory Elements in Mammalian Promoter Regions: A Case Study Using the PCK1 Promoter
Keywords: سایت های مرتبط با عامل رونویسی; phylogenetic footprinting; phosphoenolpyruvate carboxykinase; transcription factor binding sites; mammalian gene promoters
Identification of specific sequence motifs in the upstream region of 242 human miRNA genes
Keywords: سایت های مرتبط با عامل رونویسی; MicroRNA (miRNA); Motif search; Regulatory motif; Transcription factor binding sites; Promoter
A stochastic model for the evolution of transcription factor binding site abundance
Keywords: سایت های مرتبط با عامل رونویسی; Transcription factor binding sites; Evolution of gene regulation; Evolution of development;
Transposable elements as a significant source of transcription regulating signals
Keywords: سایت های مرتبط با عامل رونویسی; TE, transposable element; SINE, Short INterspersed Element; LINE, Long INterspersed Element; LTR, long terminal repeat; bp, base pair; pol, polymeraseTransposable elements; Gene regulation; Promoters; Transcription factor binding sites
Identification of highly specific localized sequence motifs in human ribosomal protein gene promoters
Keywords: سایت های مرتبط با عامل رونویسی; RP, ribosomal protein; TSS, transcription start site; TBP, TATA binding protein; PWM, position specific weight matrix; TOP, terminal oligo pyrimidineTranscription start site; Transcription initiation; Motif search; Transcription factor binding sites
Exploring Transcription Factor Binding Properties of Several Non-coding DNA Sequence Elements in the Human NF-IL6 Gene
Keywords: سایت های مرتبط با عامل رونویسی; human genome; transcription factor binding sites; sequence context of protein binding sites; conserved non-coding regions; prediction of protein binding elementsLPS, lipopolysaccharide; PMA, phorbol 12-myristate 13-acetate; EMSA, electrophoretic mobility